RNA–Protein interactions for RNA: ENST00000532460.5

CSRP1-216, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSRP1, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-216ENST00000532460 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 SLC44A5Q8NCS7 719 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 KCNG4Q8TDN1 519 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSRP1-216ENST00000532460 TRIM34Q9BYJ4 488 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 EHD4Q9H223 541 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 DDX19AQ9NUU7 478 aaKnown RBP12.86□□□□□ -0.35
CSRP1-216ENST00000532460 SRRDQ9UH36 339 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 PLIN4Q96Q06 1357 aa12.86□□□□□ -0.35
CSRP1-216ENST00000532460 SYCE3A1L190 88 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 KIF28PB7ZC32 967 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 BACE1P56817 501 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 PKN1Q16512 942 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 TREML2Q5T2D2 321 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 FAM177A1Q8N128 213 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-216ENST00000532460 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 LZTS2Q9BRK4 669 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 A0A1W2PQ27 194 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 A0A1W2PQ64 194 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 A0A1W2PQD8 194 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 C19orf81C9J6K1 198 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 OSBPP22059 807 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 HMGCS2P54868 508 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 GRM4Q14833 912 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
CSRP1-216ENST00000532460 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
CSRP1-216ENST00000532460 TMEM47Q9BQJ4 181 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 SERPINB13Q9UIV8 391 aa12.85□□□□□ -0.35
CSRP1-216ENST00000532460 USP17L10C9JJH3 530 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 TOP1P11387 765 aaKnown RBP12.84□□□□□ -0.35
CSRP1-216ENST00000532460 SMARCA1P28370 1054 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
CSRP1-216ENST00000532460 FCGRTP55899 365 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.353e-12■■■□□ 17.2
CSRP1-216ENST00000532460 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 ADALQ6DHV7 355 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 NOSTRINQ8IVI9 506 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 DIS3L2Q8IYB7 885 aaKnown RBP12.84□□□□□ -0.35
CSRP1-216ENST00000532460 CCDC17Q96LX7 622 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
CSRP1-216ENST00000532460 MORC2Q9Y6X9 1032 aaPredicted RBP12.84□□□□□ -0.35
CSRP1-216ENST00000532460 V9GY48 417 aaPredicted RBP12.84□□□□□ -0.35
CSRP1-216ENST00000532460 CNTNAP5Q8WYK1 1306 aa12.83□□□□□ -0.35
CSRP1-216ENST00000532460 DOCK1Q14185 1865 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 PALM3A6NDB9 673 aaPredicted RBP12.83□□□□□ -0.36
CSRP1-216ENST00000532460 SPTLC2O15270 562 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 PPP6R2O75170 966 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
CSRP1-216ENST00000532460 GDF11O95390 407 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 LIG1P18858 919 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
CSRP1-216ENST00000532460 MTMR2Q13614 643 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 GNL2Q13823 731 aaKnown RBP12.83□□□□□ -0.36
CSRP1-216ENST00000532460 SLC39A14Q15043 492 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 STK38Q15208 465 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 SHROOM1Q2M3G4 852 aaPredicted RBP12.83□□□□□ -0.36
CSRP1-216ENST00000532460 CMTR1Q8N1G2 835 aaKnown RBP12.83□□□□□ -0.36
CSRP1-216ENST00000532460 CCDC82Q8N4S0 544 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 BICD2Q8TD16 824 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 PHF20Q9BVI0 1012 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 TSPY26PQ9H489 355 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
CSRP1-216ENST00000532460 ZBTB21Q9ULJ3 1066 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 CLIC4Q9Y696 253 aa12.83□□□□□ -0.36
CSRP1-216ENST00000532460 PHIPQ8WWQ0 1821 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 CEBPZQ03701 1054 aaKnown RBP12.82□□□□□ -0.36
CSRP1-216ENST00000532460 PFKFB3Q16875 520 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-216ENST00000532460 FAM110CQ1W6H9 321 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 CERKLQ49MI3 558 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-216ENST00000532460 RILPL1Q5EBL4 403 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
CSRP1-216ENST00000532460 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 RAET1EQ8TD07 263 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 SH3TC2Q8TF17 1288 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 FTOQ9C0B1 505 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSRP1-216ENST00000532460 ASCC2Q9H1I8 757 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-216ENST00000532460 NUP62CLQ9H1M0 184 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 CLSTN2Q9H4D0 955 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 SH3GLB2Q9NR46 395 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 MTMR4Q9NYA4 1195 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 DACT1Q9NYF0 836 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 TMOD4Q9NZQ9 345 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 MAD2L2Q9UI95 211 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 PCDHA7Q9UN72 937 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 STX8Q9UNK0 236 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 MYPNQ86TC9 1320 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 HTTP42858 3142 aa12.82□□□□□ -0.36
CSRP1-216ENST00000532460 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
CSRP1-216ENST00000532460 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
CSRP1-216ENST00000532460 GH2P01242 217 aa12.81□□□□□ -0.36
CSRP1-216ENST00000532460 SCG2P13521 617 aa12.81□□□□□ -0.36
CSRP1-216ENST00000532460 EN2P19622 333 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms