RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 TRIM10Q9UDY6 481 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 MYO6Q9UM54 1294 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 GUCA1BQ9UMX6 200 aa21.87■■□□□ 1.09
PCF11-203ENST00000530304 RHOBTB3O94955 611 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 MYL1P05976 194 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 AMPD2Q01433 879 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 STIM1Q13586 685 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 SPTY2D1Q68D10 685 aaPredicted RBP21.86■■□□□ 1.09
PCF11-203ENST00000530304 DAGLBQ8NCG7 672 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 GIMAP8Q8ND71 665 aaPredicted RBP21.86■■□□□ 1.09
PCF11-203ENST00000530304 TRIM47Q96LD4 638 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 DNAJC7Q99615 494 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 MTMR7Q9Y216 660 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 H3BQF6 201 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 HDXQ7Z353 690 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 CCDC148Q8NFR7 591 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 SETDB2Q96T68 719 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 ABCB6Q9NP58 842 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 BARHL2Q9NY43 387 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 CAPN11Q9UMQ6 739 aa21.86■■□□□ 1.09
PCF11-203ENST00000530304 STXBP3O00186 592 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 PSMA7O14818 248 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 ERLIN1O75477 346 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 MCM6Q14566 821 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 GALNT17Q6IS24 598 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 NBPF5PQ86XG9 351 aaPredicted RBP21.85■■□□□ 1.09
PCF11-203ENST00000530304 NEK11Q8NG66 645 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 SH3RF3Q8TEJ3 882 aaPredicted RBP21.85■■□□□ 1.09
PCF11-203ENST00000530304 LRRC15Q8TF66 581 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 MAST2Q6P0Q8 1798 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 TSPY3P0CV98 308 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 TSPY8P0CW00 308 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 WDR59Q6PJI9 974 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 MAGEC2Q9UBF1 373 aaPredicted RBP21.85■■□□□ 1.09
PCF11-203ENST00000530304 L1RE1Q9UN81 338 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 SPATA31A5Q5VU36 1347 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 SPATA31A7Q8IWB4 1347 aa21.85■■□□□ 1.09
PCF11-203ENST00000530304 GYS2P54840 703 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 NCAPH2Q6IBW4 605 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 TTI2Q6NXR4 508 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 LAD1O00515 517 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 NT5C2P49902 561 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 HNRNPH2P55795 449 aaKnown RBP21.84■■□□□ 1.09
PCF11-203ENST00000530304 VSNL1P62760 191 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 TSR1Q2NL82 804 aaKnown RBP21.84■■□□□ 1.09
PCF11-203ENST00000530304 HAUS4Q9H6D7 363 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 SUGCTQ9HAC7 445 aa21.84■■□□□ 1.09
PCF11-203ENST00000530304 SRP68Q9UHB9 627 aaKnown RBP21.84■■□□□ 1.09
PCF11-203ENST00000530304 NRAPQ86VF7 1730 aa21.83■■□□□ 1.09
PCF11-203ENST00000530304 ZNF444Q8N0Y2 327 aaPredicted RBP21.83■■□□□ 1.09
PCF11-203ENST00000530304 NOA1Q8NC60 698 aaKnown RBP21.83■■□□□ 1.09
PCF11-203ENST00000530304 PDE11AQ9HCR9 933 aa21.83■■□□□ 1.09
PCF11-203ENST00000530304 STX8Q9UNK0 236 aa21.83■■□□□ 1.09
PCF11-203ENST00000530304 IRS2Q9Y4H2 1338 aa21.83■■□□□ 1.09
PCF11-203ENST00000530304 B4DLN1 442 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 LDHBP07195 334 aaKnown RBP21.83■■□□□ 1.08
PCF11-203ENST00000530304 PRPHP41219 470 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 DNM2P50570 870 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 GPS2Q13227 327 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 CCDC178Q5BJE1 867 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 TXLNBQ8N3L3 684 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 SLC44A5Q8NCS7 719 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 TCP11L1Q9NUJ3 509 aa21.83■■□□□ 1.08
PCF11-203ENST00000530304 PALM3A6NDB9 673 aaPredicted RBP21.82■■□□□ 1.08
PCF11-203ENST00000530304 HERVK_113P62684 666 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 SEMA3FQ13275 785 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 EEF2KMTQ96G04 330 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 TMEM47Q9BQJ4 181 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 ADAM21Q9UKJ8 722 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 PSMD14O00487 310 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 RGL2O15211 777 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 GOLGA8HP0CJ92 632 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 TM4SF1P30408 202 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 CSGALNACT2Q8N6G5 542 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 DHTKD1Q96HY7 919 aaPredicted RBP21.82■■□□□ 1.08
PCF11-203ENST00000530304 DUSP9Q99956 384 aaKnown RBP21.82■■□□□ 1.08
PCF11-203ENST00000530304 TUBGCP2Q9BSJ2 902 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 NARFQ9UHQ1 456 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 TFR2Q9UP52 801 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 ROBO3Q96MS0 1386 aa21.82■■□□□ 1.08
PCF11-203ENST00000530304 ENC1O14682 589 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 SRGNP10124 158 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 PLCG1P19174 1290 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 TRAPPC11Q7Z392 1133 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 NOC3LQ8WTT2 800 aaKnown RBP21.81■■□□□ 1.08
PCF11-203ENST00000530304 AGPAT5Q9NUQ2 364 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 EXOC1Q9NV70 894 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 CNTNAP4Q9C0A0 1308 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 DIXDC1Q155Q3 683 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 TXNRD1Q16881 649 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 TPTE2Q6XPS3 522 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 BARGINQ6ZT62 677 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 CABP7Q86V35 215 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 AMOTL1Q8IY63 956 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 TGFBRAP1Q8WUH2 860 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 FLT1P17948 1338 aa21.81■■□□□ 1.08
PCF11-203ENST00000530304 MEA1Q16626 185 aa21.8■■□□□ 1.08
PCF11-203ENST00000530304 CCDC122Q5T0U0 273 aa21.8■■□□□ 1.08
PCF11-203ENST00000530304 CUEDC2Q9H467 287 aa21.8■■□□□ 1.08
PCF11-203ENST00000530304 HDAC6Q9UBN7 1215 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms