RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 GTF3C2Q8WUA4 911 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-205ENST00000518196 SLF1Q9BQI6 1058 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 LZTS2Q9BRK4 669 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 ZFYVE28Q9HCC9 887 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 RBM28Q9NW13 759 aaKnown RBP15.11■□□□□ 0.01
PABPC1-205ENST00000518196 MAD2L2Q9UI95 211 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 LIMCH1Q9UPQ0 1083 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 CTDP1Q9Y5B0 961 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-205ENST00000518196 MYPNQ86TC9 1320 aa15.11■□□□□ 0.01
PABPC1-205ENST00000518196 THSD7BQ9C0I4 1608 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 PALM3A6NDB9 673 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-205ENST00000518196 KLRF2D3W0D1 207 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 FDX1P10109 184 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 RXRAP19793 462 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 PDIA3P30101 505 aaKnown RBP15.1■□□□□ 0.01
PABPC1-205ENST00000518196 TTBK2Q6IQ55 1244 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 BTNL9Q6UXG8 535 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 RASGRP2Q7LDG7 609 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 CCDC144CPQ8IYA2 1237 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 KIFC2Q96AC6 838 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 ZSCAN31Q96LW9 406 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-205ENST00000518196 P2RX7Q99572 595 aaKnown RBP15.1■□□□□ 0.01
PABPC1-205ENST00000518196 BEGAINQ9BUH8 593 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 SLKQ9H2G2 1235 aaPredicted RBP15.1■□□□□ 0.01
PABPC1-205ENST00000518196 PPP1R9AQ9ULJ8 1098 aa15.1■□□□□ 0.01
PABPC1-205ENST00000518196 CA12O43570 354 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 DHX16O60231 1041 aaKnown RBP15.09■□□□□ 0.01
PABPC1-205ENST00000518196 HERVK_113P62684 666 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 STK3Q13188 491 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 SYDE2Q5VT97 1194 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 STAG2Q8N3U4 1231 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 SMCR8Q8TEV9 937 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-205ENST00000518196 UBA5Q9GZZ9 404 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 FBXO28Q9NVF7 368 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 TPCN1Q9ULQ1 816 aa15.09■□□□□ 0.01
PABPC1-205ENST00000518196 PARP14Q460N5 1801 aa15.08■□□□□ 0.01
PABPC1-205ENST00000518196 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0
PABPC1-205ENST00000518196 ZBED4O75132 1171 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 CYP2C8P10632 490 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 SMARCA1P28370 1054 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 SLC16A2P36021 539 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 GCLCP48506 637 aaPredicted RBP15.08■□□□□ 0
PABPC1-205ENST00000518196 CCT2P78371 535 aaKnown RBP15.08■□□□□ 0
PABPC1-205ENST00000518196 SMYD5Q6GMV2 418 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 CPLX2Q6PUV4 134 aaKnown RBP15.08■□□□□ 0
PABPC1-205ENST00000518196 LBX2Q6XYB7 198 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 MB21D1Q8N884 522 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 OXER1Q8TDS5 423 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 SH2B1Q9NRF2 756 aaPredicted RBP15.08■□□□□ 0
PABPC1-205ENST00000518196 RNF186Q9NXI6 227 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0
PABPC1-205ENST00000518196 RLFQ13129 1914 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 CPLX1O14810 134 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 PFKFB2O60825 505 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 TRPA1O75762 1119 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 ME3Q16798 604 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 TMTC3Q6ZXV5 915 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 ATG4CQ96DT6 458 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 VAT1LQ9HCJ6 419 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 PRR12Q9ULL5 1215 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 ADAMTS5Q9UNA0 930 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 RABGAP1Q9Y3P9 1069 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 NID2Q14112 1375 aa15.07■□□□□ 0
PABPC1-205ENST00000518196 VWA5AO00534 786 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 TLR2O60603 784 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 PLEKHA8P1O95397 391 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 CDC27P30260 824 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 ADD1P35611 737 aaKnown RBP15.06■□□□□ 0
PABPC1-205ENST00000518196 CRHR2Q13324 411 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 ADGRF4Q8IZF3 695 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 SRBD1Q8N5C6 995 aaKnown RBP15.06■□□□□ 0
PABPC1-205ENST00000518196 SPZ1Q9BXG8 430 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 CPVLQ9H3G5 476 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 RIOX1Q9H6W3 641 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 FAM217BQ9NTX9 383 aaPredicted RBP15.06■□□□□ 0
PABPC1-205ENST00000518196 SAGE1Q9NXZ1 904 aa15.06■□□□□ 0
PABPC1-205ENST00000518196 BAZ2BQ9UIF8 2168 aaKnown RBP15.06■□□□□ 0
PABPC1-205ENST00000518196 MYH6P13533 1939 aa15.05■□□□□ 0
PABPC1-205ENST00000518196 SCRN1Q12765 414 aa15.05■□□□□ -0
PABPC1-205ENST00000518196 CCDC82Q8N4S0 544 aa15.05■□□□□ -0
PABPC1-205ENST00000518196 RRP36Q96EU6 259 aaKnown RBP15.05■□□□□ -0
PABPC1-205ENST00000518196 PAGR1Q9BTK6 254 aa15.05■□□□□ -0
PABPC1-205ENST00000518196 CFHR5Q9BXR6 569 aa15.05■□□□□ -0
PABPC1-205ENST00000518196 SLC38A10Q9HBR0 1119 aa15.05■□□□□ -0
PABPC1-205ENST00000518196 NCOA5Q9HCD5 579 aaKnown RBP15.05■□□□□ -0
PABPC1-205ENST00000518196 PNMA2Q9UL42 364 aa15.05■□□□□ -0
PABPC1-205ENST00000518196 COL11A1P12107 1806 aaPredicted RBP15.04■□□□□ -0
PABPC1-205ENST00000518196 CDKL5O76039 1030 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 CD2BP2O95400 341 aaKnown RBP15.04■□□□□ -0
PABPC1-205ENST00000518196 LARGE1O95461 756 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 TBC1D8O95759 1140 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 OAZ1P54368 228 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 AKAP17AQ02040 695 aaKnown RBP15.04■□□□□ -0
PABPC1-205ENST00000518196 PLS1Q14651 629 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 NBPF11Q86T75 865 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 ANKRD13CQ8N6S4 541 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 NECAB1Q8N987 351 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 GPRC5AQ8NFJ5 357 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 GTF3C6Q969F1 213 aa15.04■□□□□ -0
PABPC1-205ENST00000518196 SNX21Q969T3 373 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms