RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	NUP58	Q9BVL2	599 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	KCNJ14	Q9UNX9	436 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	PEAK1	Q9H792	1746 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	NCAPD2	Q15021	1401 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	RANBP6	O60518	1105 aa	Known RBP	12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	ANP32D	O95626	131 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	CARS	P49589	748 aa	Known RBP	12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	VAV2	P52735	878 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	ODF2	Q5BJF6	829 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	CDKAL1	Q5VV42	579 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	C8orf74	Q6P047	294 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	EMB	Q6PCB8	327 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	DENND2A	Q9ULE3	1009 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	ANKRD33B	A6NCL7	494 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	BTBD18	B2RXH4	712 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	CYP27B1	O15528	508 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	DPYD	Q12882	1025 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	NT5DC1	Q5TFE4	455 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	NFRKB	Q6P4R8	1299 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	CUL5	Q93034	780 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	HVCN1	Q96D96	273 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	HAUS7	Q99871	368 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	FAM167B	Q9BTA0	163 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	PAGR1	Q9BTK6	254 aa		12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	LUC7L2	Q9Y383	392 aa	Known RBP	12.37	□□□□□ -0.43
PDCD6-210	ENST00000513582	FAM170A	A1A519	330 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	RNF113A	O15541	343 aa	Known RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	PHKG2	P15735	406 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	COPB1	P53618	953 aa	Known RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	CTDSPL2	Q05D32	466 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	DRP2	Q13474	957 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	SMIM5	Q71RC9	77 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	CREG2	Q8IUH2	290 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	TRIML1	Q8N9V2	468 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	LEMD3	Q9Y2U8	911 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	GMNC	A6NCL1	334 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	MAST3	O60307	1309 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	IARS	P41252	1262 aa	Known RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	ELF3	P78545	371 aa	Predicted RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	MAB21L3	Q8N8X9	362 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	OR8K1	Q8NGG5	319 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	HOOK2	Q96ED9	719 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	SEC16B	Q96JE7	1060 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	PLIN2	Q99541	437 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582		M0R2C6	588 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	ACTN4	O43707	911 aa	Known RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	PECAM1	P16284	738 aa	Predicted RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	CUL4B	Q13620	913 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	TTF1	Q15361	905 aa	Predicted RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	CCDC96	Q2M329	555 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	CACNA2D3	Q8IZS8	1091 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	C3orf20	Q8ND61	904 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	OR2W6P	Q8NHA6	318 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	ATP6V1G3	Q96LB4	118 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	CSRNP2	Q9H175	543 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	NUCKS1	Q9H1E3	243 aa	Known RBP	12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	BLZF1	Q9H2G9	400 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	SLC12A7	Q9Y666	1083 aa		12.36	□□□□□ -0.43
PDCD6-210	ENST00000513582	PHF20L1	A8MW92	1017 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	GPAA1	O43292	621 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	FECH	P22830	423 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	GUCY2D	Q02846	1103 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	ICA1	Q05084	483 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	IFFO1	Q0D2I5	559 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	HAUS3	Q68CZ6	603 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	NCOA7	Q8NI08	942 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	OSBP2	Q969R2	916 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	EPB41L5	Q9HCM4	733 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	ASAP1	Q9ULH1	1129 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	G3BP2	Q9UN86	482 aa	Known RBP	12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	LAMA4	Q16363	1823 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	SH3TC1	Q8TE82	1336 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	GOLGA6L10	A6NI86	522 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	NCK2	O43639	380 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	DIAPH2	O60879	1101 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	FGA	P02671	866 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	RPS6KA3	P51812	740 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	KRT83	P78385	493 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	GNPTAB	Q3T906	1256 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	RRAGB	Q5VZM2	374 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	CPLX4	Q7Z7G2	160 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	TBC1D1	Q86TI0	1168 aa	Predicted RBP	12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	MMGT1	Q8N4V1	131 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	MAGEC3	Q8TD91	643 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	ITFG2	Q969R8	447 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	EPSTI1	Q96J88	318 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	VPS54	Q9P1Q0	977 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	PCDHB6	Q9Y5E3	794 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	ITIH6	Q6UXX5	1313 aa		12.35	□□□□□ -0.43
PDCD6-210	ENST00000513582	MGRN1	O60291	552 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	ANTXR2	P58335	489 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	RNASE9	P60153	205 aa	Known RBP	12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	NBPF9	Q3BBW0	867 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	KRT26	Q7Z3Y9	468 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	CNKSR2	Q8WXI2	1034 aa		12.34	□□□□□ -0.43
PDCD6-210	ENST00000513582	UIMC1	Q96RL1	719 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms