RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 PRR12Q9ULL5 1215 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 AGTPBP1Q9UPW5 1226 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 MYPNQ86TC9 1320 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
PFDN1-204ENST00000512707 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
PFDN1-204ENST00000512707 VPS37CA5D8V6 355 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-204ENST00000512707 STX6O43752 255 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 ZBED4O75132 1171 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 FDPSP14324 419 aaKnown RBP12.52□□□□□ -0.41
PFDN1-204ENST00000512707 OSBPP22059 807 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 COG2Q14746 738 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-204ENST00000512707 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
PFDN1-204ENST00000512707 PIGSQ96S52 555 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 CPVLQ9H3G5 476 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.41
PFDN1-204ENST00000512707 CCL15-CCL14A0A0B4J2E2 113 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 hCG_1642624A0A1W2PR95 340 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 MANSC4A6NHS7 340 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-204ENST00000512707 CYTH3O43739 400 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 SYT1P21579 422 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 CALML3P27482 149 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 LBX1P52954 281 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 NAPAP54920 295 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 CCL15Q16663 113 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 DEFB115Q30KQ5 88 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 PPP1R18Q6NYC8 613 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 CATSPERGQ6ZRH7 1159 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 FBXO11Q86XK2 927 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 RASAL3Q86YV0 1011 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 GTF3C2Q8WUA4 911 aaPredicted RBP12.51□□□□□ -0.41
PFDN1-204ENST00000512707 AMNQ9BXJ7 453 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 ATP6V1DQ9Y5K8 247 aa12.51□□□□□ -0.41
PFDN1-204ENST00000512707 SLC10A3P09131 477 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
PFDN1-204ENST00000512707 HOXA7P31268 230 aaPredicted RBP12.5□□□□□ -0.41
PFDN1-204ENST00000512707 GJA5P36382 358 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 FOSBP53539 338 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 INHBEP58166 350 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 NLRP5P59047 1200 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 SREBF2Q12772 1141 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
PFDN1-204ENST00000512707 DGKZQ13574 1117 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 QRICH1Q2TAL8 776 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 MCTP1Q6DN14 999 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 GALNT17Q6IS24 598 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 MB21D1Q8N884 522 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 FBXO18Q8NFZ0 1043 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 BICD2Q8TD16 824 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 MTMR8Q96EF0 704 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
PFDN1-204ENST00000512707 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 BARHL2Q9NY43 387 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 SLC45A1Q9Y2W3 748 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 LOC285556D6RIA3 1793 aa12.5□□□□□ -0.41
PFDN1-204ENST00000512707 DTNBO60941 627 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 GNA11P29992 359 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 DDIT3P35638 169 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 OAZ1P54368 228 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 PLCB2Q00722 1185 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 MAP2K1Q02750 393 aaPredicted RBP12.49□□□□□ -0.41
PFDN1-204ENST00000512707 PKN1Q16512 942 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 TREML2Q5T2D2 321 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 KRT40Q6A162 431 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 WWC2Q6AWC2 1192 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 ANKRD23Q86SG2 305 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 GPKOWQ92917 476 aaPredicted RBP eCLIP12.49□□□□□ -0.41
PFDN1-204ENST00000512707 VPS54Q9P1Q0 977 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 PCDHA1Q9Y5I3 950 aa12.49□□□□□ -0.41
PFDN1-204ENST00000512707 ABCB11O95342 1321 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 STXBP3O00186 592 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 VWA5AO00534 786 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 MMP1P03956 469 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ICAM1P05362 532 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ZSCAN22P10073 491 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-204ENST00000512707 KRT2P35908 639 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ADCY7P51828 1080 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 SLC35G1Q2M3R5 365 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ATG4CQ96DT6 458 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 AIFM3Q96NN9 605 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 PARK7Q99497 189 aaKnown RBP12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ASCC2Q9H1I8 757 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-204ENST00000512707 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
PFDN1-204ENST00000512707 CCPG1Q9ULG6 757 aa12.48□□□□□ -0.41
PFDN1-204ENST00000512707 MRPL11Q9Y3B7 192 aaKnown RBP12.48□□□□□ -0.41
PFDN1-204ENST00000512707 ESYT2A0FGR8 921 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 PDHXO00330 501 aa12.47□□□□□ -0.41
PFDN1-204ENST00000512707 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
PFDN1-204ENST00000512707 MRPL12P52815 198 aaKnown RBP12.47□□□□□ -0.41
PFDN1-204ENST00000512707 GUCY1B3Q02153 619 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms