RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ACSL6Q9UKU0 697 aa8.77□□□□□ -1.01
NUP54-209ENST00000510569 FHOD1Q9Y613 1164 aa8.77□□□□□ -1.01
NUP54-209ENST00000510569 KRTAP9-7A8MTY7 169 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 ABLIM1O14639 778 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 SOX9P48436 509 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 ZNF445P59923 1031 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 SRSF3P84103 164 aaKnown RBP8.76□□□□□ -1.01
NUP54-209ENST00000510569 PAK2Q13177 524 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 FBXW10Q5XX13 1052 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 OLFML2BQ68BL8 750 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 RUFY4Q6ZNE9 571 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 SPATA32Q96LK8 384 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 TNFRSF12AQ9NP84 129 aa8.76□□□□□ -1.01
NUP54-209ENST00000510569 ZNF214Q9UL59 606 aaPredicted RBP8.76□□□□□ -1.01
NUP54-209ENST00000510569 CNOT6Q9ULM6 557 aaKnown RBP8.76□□□□□ -1.01
NUP54-209ENST00000510569 H0Y8X5 98 aa8.75□□□□□ -1.01
NUP54-209ENST00000510569 SDHBP21912 280 aa8.75□□□□□ -1.01
NUP54-209ENST00000510569 ARL4AP40617 200 aa8.75□□□□□ -1.01
NUP54-209ENST00000510569 JMJD8Q96S16 334 aa8.75□□□□□ -1.01
NUP54-209ENST00000510569 CNTD2Q9H8S5 307 aa8.75□□□□□ -1.01
NUP54-209ENST00000510569 GINM1Q9NU53 330 aa8.75□□□□□ -1.01
NUP54-209ENST00000510569 KCTD3Q9Y597 815 aa8.75□□□□□ -1.01
NUP54-209ENST00000510569 RFXAPO00287 272 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 MPOP05164 745 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 PRKCAP17252 672 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 CD247P20963 164 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 SSPNQ14714 243 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 CWF19L1Q69YN2 538 aaKnown RBP8.74□□□□□ -1.01
NUP54-209ENST00000510569 RASGRP4Q8TDF6 673 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 SIGLEC10Q96LC7 697 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 SIRT5Q9NXA8 310 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 KLHL14Q9P2G3 628 aa8.74□□□□□ -1.01
NUP54-209ENST00000510569 EPHB3P54753 998 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 CYP4F8P98187 520 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 ZNF385BQ569K4 471 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 CYP2R1Q6VVX0 501 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 NUP43Q8NFH3 380 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 KRTAP4-9Q9BYQ8 210 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 IMPACTQ9P2X3 320 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 ADAMTS20P59510 1910 aa8.73□□□□□ -1.01
NUP54-209ENST00000510569 IRS4O14654 1257 aaPredicted RBP8.72□□□□□ -1.01
NUP54-209ENST00000510569 N4BP3O15049 544 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 FGF10O15520 208 aaPredicted RBP8.72□□□□□ -1.01
NUP54-209ENST00000510569 CBFA2T2O43439 604 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 TP53P04637 393 aaPredicted RBP8.72□□□□□ -1.01
NUP54-209ENST00000510569 GSTM1P09488 218 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 INHBBP09529 407 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 TMEM62Q0P6H9 643 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 NOL9Q5SY16 702 aaKnown RBP8.72□□□□□ -1.01
NUP54-209ENST00000510569 CCDC81Q6ZN84 652 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 FIBCD1Q8N539 461 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 C19orf47Q8N9M1 422 aaKnown RBP8.72□□□□□ -1.01
NUP54-209ENST00000510569 BRF1Q92994 677 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 ZNF451Q9Y4E5 1061 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 LTBP3Q9NS15 1303 aa8.72□□□□□ -1.01
NUP54-209ENST00000510569 A0A087WZG4 1122 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 ITGA4P13612 1032 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 CDR1P51861 262 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 CBX2Q14781 532 aaPredicted RBP8.71□□□□□ -1.02
NUP54-209ENST00000510569 HLA-DQA1Q5Y7H0 255 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 TMEM151BQ8IW70 566 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 NAT16Q8N8M0 369 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 GPRASP2Q96D09 838 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 EFR3BQ9Y2G0 817 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 SF3B6Q9Y3B4 125 aaKnown RBP8.71□□□□□ -1.02
NUP54-209ENST00000510569 IRAK3Q9Y616 596 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 SLC12A7Q9Y666 1083 aa8.71□□□□□ -1.02
NUP54-209ENST00000510569 PI3P19957 117 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 GJA8P48165 433 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 GIPRP48546 466 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 MVKQ03426 396 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 TCERG1LQ5VWI1 586 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 LILRA6Q6PI73 481 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 OR6P1Q8NGX9 317 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 MZB1Q8WU39 189 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 FAM86C1Q9NVL1 165 aa8.7□□□□□ -1.02
NUP54-209ENST00000510569 NOP2P46087 812 aaKnown RBP8.69□□□□□ -1.02
NUP54-209ENST00000510569 EIF6P56537 245 aaKnown RBP8.69□□□□□ -1.02
NUP54-209ENST00000510569 HDLBPQ00341 1268 aaKnown RBP8.69□□□□□ -1.02
NUP54-209ENST00000510569 RAB3GAP1Q15042 981 aa8.69□□□□□ -1.02
NUP54-209ENST00000510569 DACT3Q96B18 629 aaPredicted RBP8.69□□□□□ -1.02
NUP54-209ENST00000510569 FCRL3Q96P31 734 aaPredicted RBP8.69□□□□□ -1.02
NUP54-209ENST00000510569 CRBNQ96SW2 442 aa8.69□□□□□ -1.02
NUP54-209ENST00000510569 HAUS7Q99871 368 aa8.69□□□□□ -1.02
NUP54-209ENST00000510569 KLHL25Q9H0H3 589 aa8.69□□□□□ -1.02
NUP54-209ENST00000510569 PHAXQ9H814 394 aaKnown RBP8.69□□□□□ -1.02
NUP54-209ENST00000510569 EPB41L4AQ9HCS5 686 aaPredicted RBP8.69□□□□□ -1.02
NUP54-209ENST00000510569 WHRNQ9P202 907 aa8.69□□□□□ -1.02
NUP54-209ENST00000510569 NUDT19A8MXV4 375 aa8.68□□□□□ -1.02
NUP54-209ENST00000510569 MSL3P1P0C860 447 aa8.68□□□□□ -1.02
NUP54-209ENST00000510569 RPTNQ6XPR3 784 aa8.68□□□□□ -1.02
NUP54-209ENST00000510569 TMC6Q7Z403 805 aa8.68□□□□□ -1.02
NUP54-209ENST00000510569 NT5DC4Q86YG4 428 aa8.68□□□□□ -1.02
NUP54-209ENST00000510569 NOL6Q9H6R4 1146 aaKnown RBP8.68□□□□□ -1.02
NUP54-209ENST00000510569 SRGAP3O43295 1099 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 IFNGR1P15260 489 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 CORO7P57737 925 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 POU4F1Q01851 419 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 NR1I3Q14994 352 aa8.67□□□□□ -1.02
NUP54-209ENST00000510569 TCEAL1Q15170 157 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 272.7 ms