RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 PHAXQ9H814 394 aaKnown RBP7.73□□□□□ -1.17
UBE2D3-225ENST00000508476 ETV2O00321 342 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 EPHX1P07099 455 aa7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 ITGA4P13612 1032 aa7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 ATF4P18848 351 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 SLC7A5Q01650 507 aa7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 CWF19L1Q69YN2 538 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 SLCO6A1Q86UG4 719 aa7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 BHLHE22Q8NFJ8 381 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 FGD4Q96M96 766 aa7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 PPP1R16BQ96T49 567 aa7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 KLHL25Q9H0H3 589 aa7.72□□□□□ -1.17
UBE2D3-225ENST00000508476 IFNGR1P15260 489 aa7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 TCF3P15923 654 aa7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 TCEAL1Q15170 157 aa7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 FCRL3Q96P31 734 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 JMJD8Q96S16 334 aa7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 ZNF552Q9H707 407 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 SLC12A7Q9Y666 1083 aa7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 MRVI1Q9Y6F6 885 aa7.71□□□□□ -1.18
UBE2D3-225ENST00000508476 CD3EP07766 207 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 RBM25P49756 843 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 HEATR6Q6AI08 1181 aaKnown RBP7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 ATG14Q6ZNE5 492 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 KCNN1Q92952 543 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 SLC26A8Q96RN1 970 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 MCMBPQ9BTE3 642 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 SGPP1Q9BX95 441 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 CAPN10Q9HC96 672 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 SUSD2Q9UGT4 822 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 TAF6LQ9Y6J9 622 aa7.7□□□□□ -1.18
UBE2D3-225ENST00000508476 NFIBO00712 420 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 TMEM253P0C7T8 217 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 CASP7P55210 303 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 KIAA1211LQ6NV74 962 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 GALNT18Q6P9A2 607 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 NAT16Q8N8M0 369 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 CRTAC1Q9NQ79 661 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 WHRNQ9P202 907 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 IMPACTQ9P2X3 320 aa7.69□□□□□ -1.18
UBE2D3-225ENST00000508476 OR14I1A6ND48 311 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 WTIPA6NIX2 430 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 BTBD11A6QL63 1104 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 FGF10O15520 208 aaPredicted RBP7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 VAMP4O75379 141 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 PNLIPP16233 465 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 PRKCAP17252 672 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 ENDOUP21128 410 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 CFPP27918 469 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 VHLLQ6RSH7 139 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 ADAT2Q7Z6V5 191 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 C1QL4Q86Z23 238 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 NUP43Q8NFH3 380 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 CD320Q9NPF0 282 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 APEX2Q9UBZ4 518 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 STRIP2Q9ULQ0 834 aa7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 SF3B6Q9Y3B4 125 aaKnown RBP7.68□□□□□ -1.18
UBE2D3-225ENST00000508476 A0A087WZG4 1122 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 A0A1W2PQ45 241 aaPredicted RBP7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 A0A1W2PQY0 241 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 NPIPB6E9PJ23 425 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 MSL3P1P0C860 447 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 MED14OSP0DP75 135 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 GLDCP23378 1020 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 ANKLE2Q86XL3 938 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 GCM1Q9NP62 436 aa7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 SMG5Q9UPR3 1016 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 DIS3Q9Y2L1 958 aaKnown RBP7.67□□□□□ -1.18
UBE2D3-225ENST00000508476 STXBP3O00186 592 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 SMAD7O15105 426 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 PEX10O60683 326 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 DLG4P78352 724 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 POU4F1Q01851 419 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 DPY19L1Q2PZI1 675 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 ZNF513Q8N8E2 541 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 PTCHD1Q96NR3 888 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 TINF2Q9BSI4 451 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 LGR4Q9BXB1 951 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 GBP3Q9H0R5 595 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 CGGBP1Q9UFW8 167 aaPredicted RBP7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 ACSL6Q9UKU0 697 aa7.66□□□□□ -1.18
UBE2D3-225ENST00000508476 TCAF2A6NFQ2 919 aa7.65□□□□□ -1.18
UBE2D3-225ENST00000508476 PPM1BO75688 479 aa7.65□□□□□ -1.18
UBE2D3-225ENST00000508476 NOP2P46087 812 aaKnown RBP7.65□□□□□ -1.18
UBE2D3-225ENST00000508476 CYP4F8P98187 520 aa7.65□□□□□ -1.18
UBE2D3-225ENST00000508476 MVKQ03426 396 aa7.65□□□□□ -1.18
UBE2D3-225ENST00000508476 LRRC56Q8IYG6 542 aaPredicted RBP7.65□□□□□ -1.18
UBE2D3-225ENST00000508476 TEX51A0A1B0GUA7 166 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 AURKAO14965 403 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 VIPR1P32241 457 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 ETFBP38117 255 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 ERVFRD-1P60508 538 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 SRSF3P84103 164 aaKnown RBP7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 KCNA10Q16322 511 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 HLA-DQA1Q5Y7H0 255 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 TMEM132EQ6IEE7 984 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 ARHGEF39Q8N4T4 335 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 TOX2Q96NM4 488 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 TNFRSF12AQ9NP84 129 aa7.64□□□□□ -1.19
UBE2D3-225ENST00000508476 KLHL14Q9P2G3 628 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms