RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 CHST13Q8NET6 341 aa21.48■■□□□ 1.03
CLDND1-217ENST00000508071 LRRCC1Q9C099 1032 aa21.48■■□□□ 1.03
CLDND1-217ENST00000508071 FEM1BQ9UK73 627 aa21.48■■□□□ 1.03
CLDND1-217ENST00000508071 GSG1L2A8MUP6 293 aa21.47■■□□□ 1.03
CLDND1-217ENST00000508071 ADCY6O43306 1168 aa21.47■■□□□ 1.03
CLDND1-217ENST00000508071 CSF2RAP15509 400 aa21.47■■□□□ 1.03
CLDND1-217ENST00000508071 PSRC1Q6PGN9 363 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-217ENST00000508071 C16orf59Q7L2K0 433 aa21.47■■□□□ 1.03
CLDND1-217ENST00000508071 ZNF444Q8N0Y2 327 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-217ENST00000508071 PBX4Q9BYU1 374 aa21.47■■□□□ 1.03
CLDND1-217ENST00000508071 ZNF287Q9HBT7 754 aa21.47■■□□□ 1.03
CLDND1-217ENST00000508071 MUC3AQ02505 3323 aa21.47■■□□□ 1.03
CLDND1-217ENST00000508071 CHD9Q3L8U1 2897 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 GRXCR1A8MXD5 290 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 PBX2P40425 430 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 OAZ1P54368 228 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 RASIP1Q5U651 963 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 FAM126BQ8IXS8 530 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 FGD4Q96M96 766 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 PPP1R12CQ9BZL4 782 aa21.46■■□□□ 1.03
CLDND1-217ENST00000508071 IGKV6D-41A0A0C4DH26 115 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 TNFRSF10AO00220 468 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 SMARCA5O60264 1052 aaPredicted RBP21.45■■□□□ 1.02
CLDND1-217ENST00000508071 ACRP10323 421 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 TDO2P48775 406 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 ZNF365Q70YC5 407 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 CCDC144CPQ8IYA2 1237 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 PPM1EQ8WY54 764 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 MKL1Q969V6 931 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 ECHDC1Q9NTX5 307 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 SYNPO2Q9UMS6 1093 aa21.45■■□□□ 1.02
CLDND1-217ENST00000508071 PRDM1O75626 825 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 TTLL1O95922 423 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 NOL8Q76FK4 1167 aaKnown RBP21.44■■□□□ 1.02
CLDND1-217ENST00000508071 GMCL1P1Q8NEA9 526 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 APPBP2Q92624 585 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 OSBP2Q969R2 916 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 CEP95Q96GE4 821 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 PRDM12Q9H4Q4 367 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 HOMER2Q9NSB8 354 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 MTMR4Q9NYA4 1195 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 MSRAQ9UJ68 235 aa21.44■■□□□ 1.02
CLDND1-217ENST00000508071 NCOR1O75376 2440 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 APPP05067 770 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 FDX1P10109 184 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 BMP3P12645 472 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 GNAT2P19087 354 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 RAB30Q15771 203 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 AKNAD1Q5T1N1 836 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 SLFN13Q68D06 897 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 LRRC47Q8N1G4 583 aaKnown RBP21.43■■□□□ 1.02
CLDND1-217ENST00000508071 KBTBD3Q8NAB2 608 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 MTIF3Q9H2K0 278 aaKnown RBP21.43■■□□□ 1.02
CLDND1-217ENST00000508071 ACAD9Q9H845 621 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 IL23AQ9NPF7 189 aa21.43■■□□□ 1.02
CLDND1-217ENST00000508071 ISY1Q9ULR0 285 aaKnown RBP21.43■■□□□ 1.02
CLDND1-217ENST00000508071 CTAGE5O15320 804 aa21.42■■□□□ 1.02
CLDND1-217ENST00000508071 RNF113AO15541 343 aaKnown RBP21.42■■□□□ 1.02
CLDND1-217ENST00000508071 GPAA1O43292 621 aa21.42■■□□□ 1.02
CLDND1-217ENST00000508071 CYP2C18P33260 490 aa21.42■■□□□ 1.02
CLDND1-217ENST00000508071 BEX3Q00994 111 aa21.42■■□□□ 1.02
CLDND1-217ENST00000508071 CNTN2Q02246 1040 aa21.42■■□□□ 1.02
CLDND1-217ENST00000508071 TNFAIP2Q03169 654 aa21.42■■□□□ 1.02
CLDND1-217ENST00000508071 KATNBL1Q9H079 304 aa21.42■■□□□ 1.02
CLDND1-217ENST00000508071 EPB41L4AQ9HCS5 686 aaPredicted RBP21.42■■□□□ 1.02
CLDND1-217ENST00000508071 ASB14A6NK59 587 aa21.41■■□□□ 1.02
CLDND1-217ENST00000508071 CABYRO75952 493 aa21.41■■□□□ 1.02
CLDND1-217ENST00000508071 CD4P01730 458 aa21.41■■□□□ 1.02
CLDND1-217ENST00000508071 NKX3-2P78367 333 aa21.41■■□□□ 1.02
CLDND1-217ENST00000508071 ATXN2LQ8WWM7 1075 aaKnown RBP21.41■■□□□ 1.02
CLDND1-217ENST00000508071 HERVK_113Q902F9 699 aa21.41■■□□□ 1.02
CLDND1-217ENST00000508071 GPATCH3Q96I76 525 aa21.41■■□□□ 1.02
CLDND1-217ENST00000508071 THEGQ9P2T0 379 aa21.41■■□□□ 1.02
CLDND1-217ENST00000508071 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.4■■□□□ 1.02
CLDND1-217ENST00000508071 TMEM232C9JQI7 657 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 FGBP02675 491 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 ZFYP08048 801 aaPredicted RBP21.4■■□□□ 1.02
CLDND1-217ENST00000508071 TSPY3P0CV98 308 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 TSPY8P0CW00 308 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 IKQ13123 557 aaPredicted RBP21.4■■□□□ 1.02
CLDND1-217ENST00000508071 CXCL17Q6UXB2 119 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 FAM133AQ8N9E0 248 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 AP5M1Q9H0R1 490 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 HIPK3Q9H422 1215 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 RNF146Q9NTX7 359 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 GBF1Q92538 1859 aa21.4■■□□□ 1.02
CLDND1-217ENST00000508071 PLIN4Q96Q06 1357 aa21.39■■□□□ 1.02
CLDND1-217ENST00000508071 ZEB2O60315 1214 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 IGFBP4P22692 258 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 STAT2P52630 851 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 PDE4BQ07343 736 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 FSCN1Q16658 493 aaKnown RBP21.39■■□□□ 1.01
CLDND1-217ENST00000508071 TLK2Q86UE8 772 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 FAM160B2Q86V87 743 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 SLC43A3Q8NBI5 491 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 NEDD1Q8NHV4 660 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 CHURC1Q8WUH1 139 aa21.39■■□□□ 1.01
CLDND1-217ENST00000508071 A1CFQ9NQ94 594 aaKnown RBP21.39■■□□□ 1.01
CLDND1-217ENST00000508071 CXXC1Q9P0U4 656 aaPredicted RBP21.39■■□□□ 1.01
CLDND1-217ENST00000508071 BDP1A6H8Y1 2624 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms