RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 SLC16A2P36021 539 aa18.28■□□□□ 0.52
CLDND1-211ENST00000506575 SNAP25P60880 206 aa18.28■□□□□ 0.52
CLDND1-211ENST00000506575 SYDE2Q5VT97 1194 aa18.28■□□□□ 0.52
CLDND1-211ENST00000506575 TTBK2Q6IQ55 1244 aa18.28■□□□□ 0.52
CLDND1-211ENST00000506575 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
CLDND1-211ENST00000506575 C11orf49Q9H6J7 331 aa18.28■□□□□ 0.52
CLDND1-211ENST00000506575 RNF146Q9NTX7 359 aa18.28■□□□□ 0.52
CLDND1-211ENST00000506575 ZNF536O15090 1300 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 TNKSO95271 1327 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 SEPT4O43236 478 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 ALAS1P13196 640 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 ZNF543Q08ER8 600 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 BTNL9Q6UXG8 535 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.27■□□□□ 0.52
CLDND1-211ENST00000506575 PNMA1Q8ND90 353 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 TRERF1Q96PN7 1200 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 NRBP1Q9UHY1 535 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 CCPG1Q9ULG6 757 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 NR2E3Q9Y5X4 410 aa18.27■□□□□ 0.52
CLDND1-211ENST00000506575 EVI5O60447 810 aa18.26■□□□□ 0.51
CLDND1-211ENST00000506575 CYP21A2P08686 494 aa18.26■□□□□ 0.51
CLDND1-211ENST00000506575 SNHG28P0DPA3 235 aa18.26■□□□□ 0.51
CLDND1-211ENST00000506575 BMP2KLQ5H9B9 411 aa18.26■□□□□ 0.51
CLDND1-211ENST00000506575 GPATCH4Q5T3I0 446 aaKnown RBP18.26■□□□□ 0.51
CLDND1-211ENST00000506575 MSL3Q8N5Y2 521 aaKnown RBP18.26■□□□□ 0.51
CLDND1-211ENST00000506575 ENAHQ8N8S7 591 aaPredicted RBP18.26■□□□□ 0.51
CLDND1-211ENST00000506575 RANBP17Q9H2T7 1088 aaKnown RBP18.26■□□□□ 0.51
CLDND1-211ENST00000506575 DNAJC25-GNG10A0A024R161 153 aa18.25■□□□□ 0.51
CLDND1-211ENST00000506575 ICAM1P05362 532 aa18.25■□□□□ 0.51
CLDND1-211ENST00000506575 MNX1P50219 401 aaPredicted RBP18.25■□□□□ 0.51
CLDND1-211ENST00000506575 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
CLDND1-211ENST00000506575 RALYLQ86SE5 291 aaKnown RBP18.25■□□□□ 0.51
CLDND1-211ENST00000506575 ANKS1AQ92625 1134 aa18.25■□□□□ 0.51
CLDND1-211ENST00000506575 MAP4K1Q92918 833 aa18.25■□□□□ 0.51
CLDND1-211ENST00000506575 PFASO15067 1338 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 SYNGAP1Q96PV0 1343 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 H0YGN5 161 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 POTEB2H3BUK9 544 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 GOLGA8HP0CJ92 632 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 ANO1Q5XXA6 986 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 ZNF467Q7Z7K2 595 aaPredicted RBP18.24■□□□□ 0.51
CLDND1-211ENST00000506575 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 ARRDC4Q8NCT1 418 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 PNMA2Q9UL42 364 aa18.24■□□□□ 0.51
CLDND1-211ENST00000506575 ALPK3Q96L96 1907 aa18.23■□□□□ 0.51
CLDND1-211ENST00000506575 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
CLDND1-211ENST00000506575 ERICH2A1L162 156 aa18.23■□□□□ 0.51
CLDND1-211ENST00000506575 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
CLDND1-211ENST00000506575 CASC1Q6TDU7 716 aa18.23■□□□□ 0.51
CLDND1-211ENST00000506575 MAMDC4Q6UXC1 1216 aa18.23■□□□□ 0.51
CLDND1-211ENST00000506575 NCOA7Q8NI08 942 aa18.23■□□□□ 0.51
CLDND1-211ENST00000506575 ESYT1Q9BSJ8 1104 aa18.23■□□□□ 0.51
CLDND1-211ENST00000506575 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
CLDND1-211ENST00000506575 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
CLDND1-211ENST00000506575 KBTBD13C9JR72 458 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 E7EWF7 191 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 RARBP10826 455 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 CNTN2Q02246 1040 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 SART3Q15020 963 aaKnown RBP18.22■□□□□ 0.51
CLDND1-211ENST00000506575 ASPRV1Q53RT3 343 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 MUM1L1Q5H9M0 696 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 NSMFQ6X4W1 530 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 CYB5R4Q7L1T6 521 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 ZHX1Q9UKY1 873 aaPredicted RBP18.22■□□□□ 0.51
CLDND1-211ENST00000506575 MCM3APO60318 1980 aa18.22■□□□□ 0.51
CLDND1-211ENST00000506575 DNM1LO00429 736 aa18.21■□□□□ 0.51
CLDND1-211ENST00000506575 IFIT3O14879 490 aaKnown RBP18.21■□□□□ 0.51
CLDND1-211ENST00000506575 DHX16O60231 1041 aaKnown RBP18.21■□□□□ 0.51
CLDND1-211ENST00000506575 PARP1P09874 1014 aaKnown RBP18.21■□□□□ 0.51
CLDND1-211ENST00000506575 COL6A1P12109 1028 aa18.21■□□□□ 0.51
CLDND1-211ENST00000506575 AKR1A1P14550 325 aa18.21■□□□□ 0.51
CLDND1-211ENST00000506575 TAL1P17542 331 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-211ENST00000506575 GJC2Q5T442 439 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-211ENST00000506575 UBA5Q9GZZ9 404 aa18.21■□□□□ 0.51
CLDND1-211ENST00000506575 ANO2Q9NQ90 1003 aa18.21■□□□□ 0.51
CLDND1-211ENST00000506575 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-211ENST00000506575 CYP39A1Q9NYL5 469 aa18.21■□□□□ 0.51
CLDND1-211ENST00000506575 SNAI1O95863 264 aaPredicted RBP18.2■□□□□ 0.5
CLDND1-211ENST00000506575 ZNF865P0CJ78 1059 aaPredicted RBP18.2■□□□□ 0.5
CLDND1-211ENST00000506575 SEC23AQ15436 765 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 ARMCX2Q7L311 632 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 C7orf61Q8IZ16 206 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 SENP6Q9GZR1 1112 aaPredicted RBP18.2■□□□□ 0.5
CLDND1-211ENST00000506575 LSG1Q9H089 658 aaKnown RBP18.2■□□□□ 0.5
CLDND1-211ENST00000506575 ABHD16BQ9H3Z7 469 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 FAM184BQ9ULE4 1060 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 WDR19Q8NEZ3 1342 aa18.2■□□□□ 0.5
CLDND1-211ENST00000506575 MYH6P13533 1939 aa18.19■□□□□ 0.5
CLDND1-211ENST00000506575 ASB14A6NK59 587 aa18.19■□□□□ 0.5
CLDND1-211ENST00000506575 ACVR2BQ13705 512 aa18.19■□□□□ 0.5
CLDND1-211ENST00000506575 CCDC144CPQ8IYA2 1237 aa18.19■□□□□ 0.5
CLDND1-211ENST00000506575 FGD4Q96M96 766 aa18.19■□□□□ 0.5
CLDND1-211ENST00000506575 CPVLQ9H3G5 476 aa18.19■□□□□ 0.5
CLDND1-211ENST00000506575 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
CLDND1-211ENST00000506575 PTPDC1A2A3K4 754 aa18.18■□□□□ 0.5
CLDND1-211ENST00000506575 CDC45O75419 566 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms