RNA–Protein interactions for RNA: ENST00000498607.2

SCG5-209, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 853 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-209ENST00000498607 H3BQV1 296 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 BRD1O95696 1058 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 XBP1P17861 261 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 FOSBP53539 338 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 HUNKP57058 714 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 SNAPC2Q13487 334 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 DGKZQ13574 1117 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 TRIM29Q14134 588 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
SCG5-209ENST00000498607 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
SCG5-209ENST00000498607 FBXO18Q8NFZ0 1043 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 SLF1Q9BQI6 1058 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 TANGO6Q9C0B7 1094 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 VAT1LQ9HCJ6 419 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 SH3GLB2Q9NR46 395 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 FBXO28Q9NVF7 368 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 PRR12Q9ULL5 1215 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 MTMR6Q9Y217 621 aa13.46□□□□□ -0.25
SCG5-209ENST00000498607 ZBTB5O15062 677 aa13.45□□□□□ -0.26
SCG5-209ENST00000498607 FLOT1O75955 427 aa13.45□□□□□ -0.26
SCG5-209ENST00000498607 ZSCAN22P10073 491 aaPredicted RBP13.45□□□□□ -0.26
SCG5-209ENST00000498607 PKP1Q13835 747 aa13.45□□□□□ -0.26
SCG5-209ENST00000498607 CDC37Q16543 378 aaPredicted RBP13.45□□□□□ -0.26
SCG5-209ENST00000498607 SPRYD7Q5W111 196 aa13.45□□□□□ -0.26
SCG5-209ENST00000498607 KRT40Q6A162 431 aa13.45□□□□□ -0.26
SCG5-209ENST00000498607 HOMER1Q86YM7 354 aa13.45□□□□□ -0.26
SCG5-209ENST00000498607 ZDHHC9Q9Y397 364 aa13.45□□□□□ -0.26
SCG5-209ENST00000498607 MYPNQ86TC9 1320 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L15C9J2P7 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L13C9JLJ4 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L11C9JVI0 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L18D6R9N7 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L22D6RA61 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L17D6RBQ6 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L19D6RCP7 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L20D6RJB6 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 ZBTB48P10074 688 aaPredicted RBP13.44□□□□□ -0.26
SCG5-209ENST00000498607 FDX1P10109 184 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 GTF2A2P52657 109 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 USP17L24Q0WX57 530 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 QRICH1Q2TAL8 776 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 PPP1R18Q6NYC8 613 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 GADL1Q6ZQY3 521 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 CATSPERGQ6ZRH7 1159 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
SCG5-209ENST00000498607 HEATR3Q7Z4Q2 680 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 SAPCD2Q86UD0 394 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 PRPF38AQ8NAV1 312 aaKnown RBP13.44□□□□□ -0.26
SCG5-209ENST00000498607 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 CCDC12Q8WUD4 166 aaPredicted RBP13.44□□□□□ -0.26
SCG5-209ENST00000498607 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.26
SCG5-209ENST00000498607 KIFC2Q96AC6 838 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 RANBP17Q9H2T7 1088 aaKnown RBP13.44□□□□□ -0.26
SCG5-209ENST00000498607 GJB4Q9NTQ9 266 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 BARHL2Q9NY43 387 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 VPS54Q9P1Q0 977 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 PPP1R9AQ9ULJ8 1098 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 TLL2Q9Y6L7 1015 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
SCG5-209ENST00000498607 COL11A1P12107 1806 aaPredicted RBP13.43□□□□□ -0.26
SCG5-209ENST00000498607 STXBP3O00186 592 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 MMP1P03956 469 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 CETPP11597 493 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 HOXA7P31268 230 aaPredicted RBP13.43□□□□□ -0.26
SCG5-209ENST00000498607 GUCY1B3Q02153 619 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 TRAF1Q13077 416 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 MOGSQ13724 837 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 OTUD7BQ6GQQ9 843 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 TMEM106CQ9BVX2 250 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 AGTPBP1Q9UPW5 1226 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 MYH15Q9Y2K3 1946 aa13.43□□□□□ -0.26
SCG5-209ENST00000498607 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 TMEM88BA6NKF7 163 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 PPP1R11O60927 126 aaPredicted RBP13.42□□□□□ -0.26
SCG5-209ENST00000498607 F13A1P00488 732 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 CALML3P27482 149 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 NAPAP54920 295 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 RESTQ13127 1097 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 PABPC4Q13310 644 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCG5-209ENST00000498607 COG2Q14746 738 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 SAFBQ15424 915 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCG5-209ENST00000498607 TREML2Q5T2D2 321 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 GALNT17Q6IS24 598 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 HHIPL1Q96JK4 782 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 PHF20Q9BVI0 1012 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 AMNQ9BXJ7 453 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 KCNJ14Q9UNX9 436 aa13.42□□□□□ -0.26
SCG5-209ENST00000498607 CCL15-CCL14A0A0B4J2E2 113 aa13.41□□□□□ -0.26
SCG5-209ENST00000498607 SLC10A3P09131 477 aa13.41□□□□□ -0.26
SCG5-209ENST00000498607 ZNF157P51786 506 aaPredicted RBP13.41□□□□□ -0.26
SCG5-209ENST00000498607 NLRP5P59047 1200 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms