RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 RRP12Q5JTH9 1297 aaKnown RBP15.32■□□□□ 0.04
FN1-226ENST00000496542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.32■□□□□ 0.042e-14■□□□□ 9.9
FN1-226ENST00000496542 ZNF589Q86UQ0 364 aaPredicted RBP15.32■□□□□ 0.04
FN1-226ENST00000496542 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
FN1-226ENST00000496542 ACAD9Q9H845 621 aa15.32■□□□□ 0.04
FN1-226ENST00000496542 RNF146Q9NTX7 359 aa15.32■□□□□ 0.04
FN1-226ENST00000496542 FGAP02671 866 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 HSPD1P10809 573 aaKnown RBP15.31■□□□□ 0.04
FN1-226ENST00000496542 SNAP25P60880 206 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 HAND2P61296 217 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 CCDC174Q6PII3 467 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 MAMDC4Q6UXC1 1216 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 ZNF467Q7Z7K2 595 aaPredicted RBP15.31■□□□□ 0.04
FN1-226ENST00000496542 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 FGD4Q96M96 766 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 AGBL1Q96MI9 1066 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.31■□□□□ 0.04
FN1-226ENST00000496542 FAM184BQ9ULE4 1060 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 CCDC171Q6TFL3 1326 aa15.31■□□□□ 0.04
FN1-226ENST00000496542 LAMA2P24043 3122 aaKnown RBP15.3■□□□□ 0.04
FN1-226ENST00000496542 A0A1W2PQ45 241 aaPredicted RBP15.3■□□□□ 0.04
FN1-226ENST00000496542 A0A1W2PQY0 241 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 ZNF536O15090 1300 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 ADAMTS4O75173 837 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 ALAS1P13196 640 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 CNTN2Q02246 1040 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 RCSD1Q6JBY9 416 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 ARMCX2Q7L311 632 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 CHD1LQ86WJ1 897 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 TICAM2Q86XR7 235 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 PDLIM7Q9NR12 457 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 PRR12Q9ULL5 1215 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
FN1-226ENST00000496542 ZMYM6O95789 1325 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 POTEB2H3BUK9 544 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 PLA2G6O60733 806 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 IGHDP01880 384 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 FGRP09769 529 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 TLE2Q04725 743 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 ACVR2BQ13705 512 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 TKFCQ3LXA3 575 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 Q7L0L9 218 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 SH3RF1Q7Z6J0 888 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 DCAF4Q8WV16 495 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 TRERF1Q96PN7 1200 aa15.29■□□□□ 0.04
FN1-226ENST00000496542 A1CFQ9NQ94 594 aaKnown RBP15.29■□□□□ 0.04
FN1-226ENST00000496542 MYADML2A6NDP7 307 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 PQBP1O60828 265 aaKnown RBP15.28■□□□□ 0.04
FN1-226ENST00000496542 TOP1P11387 765 aaKnown RBP15.28■□□□□ 0.04
FN1-226ENST00000496542 SDSP20132 328 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 ACLYP53396 1101 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 NUCB1Q02818 461 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 CCDC144BQ3MJ40 725 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 C1orf53Q5VUE5 145 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 CCDC144CPQ8IYA2 1237 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 DEFB123Q8N688 67 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 BADQ92934 168 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 ABHD16BQ9H3Z7 469 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 CCPG1Q9ULG6 757 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 COL6A3P12111 3177 aa15.28■□□□□ 0.04
FN1-226ENST00000496542 LAMA4Q16363 1823 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.04
FN1-226ENST00000496542 TRIM43BA6NCK2 446 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 ADCY6O43306 1168 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 DUSP11O75319 330 aaKnown RBP15.27■□□□□ 0.04
FN1-226ENST00000496542 C6orf222P0C671 652 aaPredicted RBP15.27■□□□□ 0.04
FN1-226ENST00000496542 SLC16A2P36021 539 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 NOVP48745 357 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 MFAP1P55081 439 aaKnown RBP15.27■□□□□ 0.04
FN1-226ENST00000496542 KCNA10Q16322 511 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 AKNAD1Q5T1N1 836 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 TTBK2Q6IQ55 1244 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 MFSD6Q6ZSS7 791 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 TBC1D10CQ8IV04 446 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 FAM133AQ8N9E0 248 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 TRIM43Q96BQ3 446 aaPredicted RBP15.27■□□□□ 0.04
FN1-226ENST00000496542 TMEM47Q9BQJ4 181 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 TSEN34Q9BSV6 310 aaKnown RBP15.27■□□□□ 0.04
FN1-226ENST00000496542 STARD7Q9NQZ5 370 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 DIAPH3Q9NSV4 1193 aa15.27■□□□□ 0.04
FN1-226ENST00000496542 LCTP09848 1927 aa15.27■□□□□ 0.03
FN1-226ENST00000496542 LRRC37A2A6NM11 1700 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 SOWAHBA6NEL2 793 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 CLTBP09497 229 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
FN1-226ENST00000496542 MUM1L1Q5H9M0 696 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 SYDE2Q5VT97 1194 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 NSMFQ6X4W1 530 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 KLHDC9Q8NEP7 349 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 NUP133Q8WUM0 1156 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 OSBPL3Q9H4L5 887 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 SPC25Q9HBM1 224 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 CUL9Q8IWT3 2517 aa15.26■□□□□ 0.03
FN1-226ENST00000496542 NEDD4P46934 1319 aa15.25■□□□□ 0.03
FN1-226ENST00000496542 MOXD2PA6NHM9 499 aa15.25■□□□□ 0.03
FN1-226ENST00000496542 ASB14A6NK59 587 aa15.25■□□□□ 0.03
FN1-226ENST00000496542 ICAM1P05362 532 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms