RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CCDC129Q6ZRS4 1044 aa27.56■■■□□ 2
COL27A1-208ENST00000494780 TOX2Q96NM4 488 aa27.56■■■□□ 2
COL27A1-208ENST00000494780 TSPY2A6NKD2 308 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 DLL1O00548 723 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 CST5P28325 142 aaPredicted RBP27.55■■■□□ 2
COL27A1-208ENST00000494780 KCNA10Q16322 511 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 ZNF697Q5TEC3 545 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 ARMCX2Q7L311 632 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 ANKRD33Q7Z3H0 272 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 EVI5LQ96CN4 794 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 ACAD9Q9H845 621 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 STX8Q9UNK0 236 aa27.55■■■□□ 2
COL27A1-208ENST00000494780 COL6A3P12111 3177 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 RAG1P15918 1043 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 MCCP23508 829 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 ITGB8P26012 769 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 CTDSPL2Q05D32 466 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 IKQ13123 557 aaPredicted RBP27.54■■■□□ 2
COL27A1-208ENST00000494780 TKFCQ3LXA3 575 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 GUCD1Q96NT3 240 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 SPC25Q9HBM1 224 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 HOMER2Q9NSB8 354 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 ANAPC4Q9UJX5 808 aa27.54■■■□□ 2
COL27A1-208ENST00000494780 ZNF536O15090 1300 aa27.53■■■□□ 2
COL27A1-208ENST00000494780 DCDC2CA8MYV0 355 aa27.53■■■□□ 2
COL27A1-208ENST00000494780 CCDC144BQ3MJ40 725 aa27.53■■■□□ 2
COL27A1-208ENST00000494780 RCSD1Q6JBY9 416 aa27.53■■■□□ 2
COL27A1-208ENST00000494780 PCSK9Q8NBP7 692 aaKnown RBP27.53■■■□□ 2
COL27A1-208ENST00000494780 UPF3AQ9H1J1 476 aaKnown RBP27.53■■■□□ 2
COL27A1-208ENST00000494780 IL17RBQ9NRM6 502 aa27.53■■■□□ 2
COL27A1-208ENST00000494780 TMEM39AQ9NV64 488 aa27.53■■■□□ 2
COL27A1-208ENST00000494780 ELP1O95163 1332 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 MYADML2A6NDP7 307 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 C6orf222P0C671 652 aaPredicted RBP27.52■■■□□ 2
COL27A1-208ENST00000494780 GJA9P57773 515 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 SMAD3P84022 425 aaKnown RBP27.52■■■□□ 2
COL27A1-208ENST00000494780 CNTN2Q02246 1040 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 FAAP100Q0VG06 881 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 CCDC144CPQ8IYA2 1237 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 FAM133AQ8N9E0 248 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 AGBL1Q96MI9 1066 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 GLT1D1Q96MS3 346 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 INCENPQ9NQS7 918 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 HELLSQ9NRZ9 838 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 RNF146Q9NTX7 359 aa27.52■■■□□ 2
COL27A1-208ENST00000494780 ADCY6O43306 1168 aa27.51■■□□□ 1.99
COL27A1-208ENST00000494780 ALX1Q15699 326 aa27.51■■□□□ 1.99
COL27A1-208ENST00000494780 VPS53Q5VIR6 699 aa27.51■■□□□ 1.99
COL27A1-208ENST00000494780 KCTD1Q719H9 257 aa27.51■■□□□ 1.99
COL27A1-208ENST00000494780 FAM161BQ96MY7 647 aa27.51■■□□□ 1.99
COL27A1-208ENST00000494780 KATNBL1Q9H079 304 aa27.51■■□□□ 1.99
COL27A1-208ENST00000494780 A1CFQ9NQ94 594 aaKnown RBP27.51■■□□□ 1.99
COL27A1-208ENST00000494780 ORC4O43929 436 aa27.5■■□□□ 1.99
COL27A1-208ENST00000494780 NOVP48745 357 aa27.5■■□□□ 1.99
COL27A1-208ENST00000494780 PDE1AP54750 535 aa27.5■■□□□ 1.99
COL27A1-208ENST00000494780 FPGSQ05932 587 aa27.5■■□□□ 1.99
COL27A1-208ENST00000494780 HDAC1Q13547 482 aaPredicted RBP27.5■■□□□ 1.99
COL27A1-208ENST00000494780 TICAM2Q86XR7 235 aa27.5■■□□□ 1.99
COL27A1-208ENST00000494780 TRERF1Q96PN7 1200 aa27.5■■□□□ 1.99
COL27A1-208ENST00000494780 CRBNQ96SW2 442 aa27.5■■□□□ 1.99
COL27A1-208ENST00000494780 MCM3APO60318 1980 aa27.49■■□□□ 1.99
COL27A1-208ENST00000494780 MROH7Q68CQ1 1323 aa27.49■■□□□ 1.99
COL27A1-208ENST00000494780 RANBP6O60518 1105 aaKnown RBP27.49■■□□□ 1.99
COL27A1-208ENST00000494780 NMT2O60551 498 aa27.49■■□□□ 1.99
COL27A1-208ENST00000494780 ASGR1P07306 291 aa27.49■■□□□ 1.99
COL27A1-208ENST00000494780 FGRP09769 529 aa27.49■■□□□ 1.99
COL27A1-208ENST00000494780 CHMP4CQ96CF2 233 aa27.49■■□□□ 1.99
COL27A1-208ENST00000494780 PRR12Q9ULL5 1215 aa27.49■■□□□ 1.99
COL27A1-208ENST00000494780 ASB14A6NK59 587 aa27.48■■□□□ 1.99
COL27A1-208ENST00000494780 CDK7P50613 346 aa27.48■■□□□ 1.99
COL27A1-208ENST00000494780 EPHB4P54760 987 aa27.48■■□□□ 1.99
COL27A1-208ENST00000494780 NKX3-2P78367 333 aa27.48■■□□□ 1.99
COL27A1-208ENST00000494780 IRX5P78411 483 aaPredicted RBP27.48■■□□□ 1.99
COL27A1-208ENST00000494780 GNASQ5JWF2 1037 aa27.48■■□□□ 1.99
COL27A1-208ENST00000494780 RNPC3Q96LT9 517 aaKnown RBP27.48■■□□□ 1.99
COL27A1-208ENST00000494780 SOWAHBA6NEL2 793 aa27.47■■□□□ 1.99
COL27A1-208ENST00000494780 ALAS1P13196 640 aa27.47■■□□□ 1.99
COL27A1-208ENST00000494780 CCDC174Q6PII3 467 aa27.47■■□□□ 1.99
COL27A1-208ENST00000494780 DCAF4Q8WV16 495 aa27.47■■□□□ 1.99
COL27A1-208ENST00000494780 SEMA6BQ9H3T3 888 aa27.47■■□□□ 1.99
COL27A1-208ENST00000494780 A0A0U1RQG5 324 aaPredicted RBP27.46■■□□□ 1.99
COL27A1-208ENST00000494780 TIMP1P01033 207 aa27.46■■□□□ 1.99
COL27A1-208ENST00000494780 TNFAIP2Q03169 654 aa27.46■■□□□ 1.99
COL27A1-208ENST00000494780 MCMDC2Q4G0Z9 681 aa27.46■■□□□ 1.99
COL27A1-208ENST00000494780 VTI1AQ96AJ9 217 aa27.46■■□□□ 1.99
COL27A1-208ENST00000494780 TBX21Q9UL17 535 aa27.46■■□□□ 1.99
COL27A1-208ENST00000494780 CTAGE5O15320 804 aa27.45■■□□□ 1.98
COL27A1-208ENST00000494780 FGAP02671 866 aa27.45■■□□□ 1.98
COL27A1-208ENST00000494780 SNAP25P60880 206 aa27.45■■□□□ 1.98
COL27A1-208ENST00000494780 RASGRP2Q7LDG7 609 aa27.45■■□□□ 1.98
COL27A1-208ENST00000494780 FAM227BQ96M60 508 aa27.45■■□□□ 1.98
COL27A1-208ENST00000494780 CDX2Q99626 313 aaPredicted RBP27.45■■□□□ 1.98
COL27A1-208ENST00000494780 ARVCFO00192 962 aa27.44■■□□□ 1.98
COL27A1-208ENST00000494780 CCDC96Q2M329 555 aa27.44■■□□□ 1.98
COL27A1-208ENST00000494780 TOMM22Q9NS69 142 aa27.44■■□□□ 1.98
COL27A1-208ENST00000494780 CYP39A1Q9NYL5 469 aa27.44■■□□□ 1.98
COL27A1-208ENST00000494780 CCPG1Q9ULG6 757 aa27.44■■□□□ 1.98
COL27A1-208ENST00000494780 MTMR7Q9Y216 660 aa27.44■■□□□ 1.98
COL27A1-208ENST00000494780 ZMYM6O95789 1325 aa27.43■■□□□ 1.98
COL27A1-208ENST00000494780 A0A0D9SFI3 127 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms