RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 NRBP1Q9UHY1 535 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 FEM1BQ9UK73 627 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 PRR12Q9ULL5 1215 aa14.02□□□□□ -0.17
SRSF4-204ENST00000489898 BAZ2BQ9UIF8 2168 aaKnown RBP14.02□□□□□ -0.17
SRSF4-204ENST00000489898 SYNRGQ9UMZ2 1314 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 A0A1W2PPC1 479 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 TMEM232C9JQI7 657 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 PTGS1P23219 599 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 COPB2P35606 906 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 STAT2P52630 851 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 SNAP25P60880 206 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
SRSF4-204ENST00000489898 MUM1L1Q5H9M0 696 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
SRSF4-204ENST00000489898 RANBP17Q9H2T7 1088 aaKnown RBP14.01□□□□□ -0.17
SRSF4-204ENST00000489898 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 STX8Q9UNK0 236 aa14.01□□□□□ -0.17
SRSF4-204ENST00000489898 MYH7BA7E2Y1 1941 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 SOWAHBA6NEL2 793 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 TSPY2A6NKD2 308 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 RAD21O60216 631 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 PDHBP11177 359 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 MCCP23508 829 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 CNTN2Q02246 1040 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 COL9A3Q14050 684 aaPredicted RBP14□□□□□ -0.17
SRSF4-204ENST00000489898 AKNAD1Q5T1N1 836 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 TTC22Q5TAA0 569 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 CHMP4CQ96CF2 233 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 CWC22Q9HCG8 908 aaKnown RBP14□□□□□ -0.17
SRSF4-204ENST00000489898 PHF24Q9UPV7 400 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 NR2E3Q9Y5X4 410 aa14□□□□□ -0.17
SRSF4-204ENST00000489898 TRIM6-TRIM34B2RNG4 842 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 NKX3-2P78367 333 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 KCTD2Q14681 263 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 SLC35G1Q2M3R5 365 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 TMEM63BQ5T3F8 832 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 C1orf53Q5VUE5 145 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 CPXCR1Q8N123 301 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 MSL3Q8N5Y2 521 aaKnown RBP13.99□□□□□ -0.17
SRSF4-204ENST00000489898 KLHDC9Q8NEP7 349 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 LRCH3Q96II8 777 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 PURBQ96QR8 312 aaKnown RBP13.99□□□□□ -0.17
SRSF4-204ENST00000489898 XIRP2A4UGR9 3374 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 SIP14410 1827 aa13.99□□□□□ -0.17
SRSF4-204ENST00000489898 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
SRSF4-204ENST00000489898 ITGB8P26012 769 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 CNGA1P29973 690 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 SLC1A4P43007 532 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 RTP1P59025 263 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 CWC27Q6UX04 472 aaKnown RBP13.98□□□□□ -0.17
SRSF4-204ENST00000489898 FAM160B2Q86V87 743 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 CHST13Q8NET6 341 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 MORC4Q8TE76 937 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 DCAF4Q8WV16 495 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 RILPL2Q969X0 211 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 DSCC1Q9BVC3 393 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 UPF3AQ9H1J1 476 aaKnown RBP13.98□□□□□ -0.17
SRSF4-204ENST00000489898 PDLIM7Q9NR12 457 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 RNF146Q9NTX7 359 aa13.98□□□□□ -0.17
SRSF4-204ENST00000489898 FRMPD2Q68DX3 1309 aaPredicted RBP13.97□□□□□ -0.17
SRSF4-204ENST00000489898 NFIBO00712 420 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 PGK1P00558 417 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 SLC3A2P08195 630 aaKnown RBP13.97□□□□□ -0.17
SRSF4-204ENST00000489898 TOP1P11387 765 aaKnown RBP13.97□□□□□ -0.17
SRSF4-204ENST00000489898 CST5P28325 142 aaPredicted RBP13.97□□□□□ -0.17
SRSF4-204ENST00000489898 SLC16A2P36021 539 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 ATN1P54259 1190 aaPredicted RBP13.97□□□□□ -0.17
SRSF4-204ENST00000489898 ZNF543Q08ER8 600 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 TRIM60Q495X7 471 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 ARMCX2Q7L311 632 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 CLEC4DQ8WXI8 215 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
SRSF4-204ENST00000489898 CPVLQ9H3G5 476 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 ACAD9Q9H845 621 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.97□□□□□ -0.17
SRSF4-204ENST00000489898 CYP39A1Q9NYL5 469 aa13.97□□□□□ -0.17
SRSF4-204ENST00000489898 RAD50Q92878 1312 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.96□□□□□ -0.17
SRSF4-204ENST00000489898 A0A1W2PQ45 241 aaPredicted RBP13.96□□□□□ -0.17
SRSF4-204ENST00000489898 A0A1W2PQY0 241 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 ICAM1P05362 532 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 FDX1P10109 184 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 PCP11498 1178 aaKnown RBP13.96□□□□□ -0.17
SRSF4-204ENST00000489898 AKR1A1P14550 325 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 SEC23AQ15436 765 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 SLC39A5Q6ZMH5 540 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 STOX1Q6ZVD7 989 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 CCDC144CPQ8IYA2 1237 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 ENAHQ8N8S7 591 aaPredicted RBP13.96□□□□□ -0.17
SRSF4-204ENST00000489898 ANKS1AQ92625 1134 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 HOMER2Q9NSB8 354 aa13.96□□□□□ -0.17
SRSF4-204ENST00000489898 TRIM43BA6NCK2 446 aa13.95□□□□□ -0.18
SRSF4-204ENST00000489898 ZBED4O75132 1171 aa13.95□□□□□ -0.18
SRSF4-204ENST00000489898 ADCYAP1R1P41586 468 aa13.95□□□□□ -0.18
SRSF4-204ENST00000489898 PTH1RQ03431 593 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms