RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 FADS2P1A8MWK0 482 aa7.54□□□□□ -1.2
SMARCC1-207ENST00000485833 EFEMP2O95967 443 aa7.54□□□□□ -1.2
SMARCC1-207ENST00000485833 GNL2Q13823 731 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-207ENST00000485833 ZNF124Q15973 351 aa7.54□□□□□ -1.2
SMARCC1-207ENST00000485833 HEATR6Q6AI08 1181 aaKnown RBP7.54□□□□□ -1.2
SMARCC1-207ENST00000485833 PPP1R16BQ96T49 567 aa7.54□□□□□ -1.2
SMARCC1-207ENST00000485833 GBP3Q9H0R5 595 aa7.54□□□□□ -1.2
SMARCC1-207ENST00000485833 GSTM1P09488 218 aa7.53□□□□□ -1.2
SMARCC1-207ENST00000485833 GALK1P51570 392 aa7.53□□□□□ -1.2
SMARCC1-207ENST00000485833 RTP1P59025 263 aa7.53□□□□□ -1.2
SMARCC1-207ENST00000485833 TINF2Q9BSI4 451 aa7.53□□□□□ -1.2
SMARCC1-207ENST00000485833 TSPAN15O95858 294 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 SSBP05455 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 EPHX1P07099 455 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 CEBPAP49715 358 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 POU4F1Q01851 419 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 HSF5Q4G112 596 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 GALNT18Q6P9A2 607 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 VHLLQ6RSH7 139 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 SYDE1Q6ZW31 735 aaPredicted RBP7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 SLCO6A1Q86UG4 719 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 ADCY4Q8NFM4 1077 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 ZDHHC15Q96MV8 337 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 CRTAC1Q9NQ79 661 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 DIS3Q9Y2L1 958 aaKnown RBP7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
SMARCC1-207ENST00000485833 PDE6BP35913 854 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 NOP2P46087 812 aaKnown RBP7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 PPP2R5DQ14738 602 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 KIAA1211LQ6NV74 962 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 SIRT2Q8IXJ6 389 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 NAT16Q8N8M0 369 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 SLC26A8Q96RN1 970 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 PLCD4Q9BRC7 762 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 KCNK12Q9HB15 430 aa7.51□□□□□ -1.21
SMARCC1-207ENST00000485833 A0A1W2PQ45 241 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 A0A1W2PQY0 241 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 WTIPA6NIX2 430 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 PPM1BO75688 479 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 CD3EP07766 207 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 TNNI3KQ59H18 835 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 CYP2R1Q6VVX0 501 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 ADAT2Q7Z6V5 191 aaKnown RBP7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 TMEM52Q8NDY8 209 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 FGD4Q96M96 766 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 FCRL3Q96P31 734 aaPredicted RBP7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.5□□□□□ -1.215e-10■□□□□ 9.3
SMARCC1-207ENST00000485833 IGSF5Q9NSI5 407 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 SUSD2Q9UGT4 822 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 MRVI1Q9Y6F6 885 aa7.5□□□□□ -1.21
SMARCC1-207ENST00000485833 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 SMAD7O15105 426 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 FGF10O15520 208 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 FGRP09769 529 aa7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 IFNGR1P15260 489 aa7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 PNLIPP16233 465 aa7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 JAG1P78504 1218 aa7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 ADGRF1Q5T601 910 aa7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 ZNF605Q86T29 641 aa7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 CGGBP1Q9UFW8 167 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-207ENST00000485833 ANKRD34BA5PLL1 514 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 OR14I1A6ND48 311 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 DBX1A6NMT0 343 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 E9PSI1 815 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 NFIBO00712 420 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 PEX10O60683 326 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 RAP1GAPP47736 663 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 ARID5AQ03989 594 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 NCAPHQ15003 741 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 HLA-DQA1Q5Y7H0 255 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 ARHGEF39Q8N4T4 335 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 RCC1LQ96I51 464 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 JMJD8Q96S16 334 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 ZNF552Q9H707 407 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 ACTR10Q9NZ32 417 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 PRKAG3Q9UGI9 489 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 SUGT1Q9Y2Z0 365 aa7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 ZCCHC6Q5VYS8 1495 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-207ENST00000485833 KRT1P04264 644 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 NAT2P11245 290 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 PRKCAP17252 672 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 GLDCP23378 1020 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 ZNF143P52747 638 aaPredicted RBP7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 GRB10Q13322 594 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 KIR3DS1Q14943 382 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 NUP43Q8NFH3 380 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 MCOLN1Q9GZU1 580 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 IMPACTQ9P2X3 320 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 ACSL6Q9UKU0 697 aa7.47□□□□□ -1.21
SMARCC1-207ENST00000485833 HRKO00198 91 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 TMEM253P0C7T8 217 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 C1QTNF9P0C862 333 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 MED14OSP0DP75 135 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 ARL4AP40617 200 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 ERVFRD-1P60508 538 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 LAPTM5Q13571 262 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 RCSD1Q6JBY9 416 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 MCF2L2Q86YR7 1114 aa7.46□□□□□ -1.22
SMARCC1-207ENST00000485833 JAMLQ86YT9 394 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms