RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ZHX1Q9UKY1 873 aaPredicted RBP18.03■□□□□ 0.48
CDK9-203ENST00000480353 CCPG1Q9ULG6 757 aa18.03■□□□□ 0.48
CDK9-203ENST00000480353 PRR12Q9ULL5 1215 aa18.03■□□□□ 0.48
CDK9-203ENST00000480353 ZMYND8Q9ULU4 1186 aaPredicted RBP18.03■□□□□ 0.48
CDK9-203ENST00000480353 PFASO15067 1338 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 NEDD4P46934 1319 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 RAD50Q92878 1312 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 SMCHD1A6NHR9 2005 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 POTEB2H3BUK9 544 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 CEP290O15078 2479 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 KDM4AO75164 1064 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 AKR1A1P14550 325 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 GSPT1P15170 499 aaKnown RBP18.02■□□□□ 0.48
CDK9-203ENST00000480353 SNAP25P60880 206 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 AGBL1Q96MI9 1066 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 KRT23Q9C075 422 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 KAT14Q9H8E8 782 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 CNNM2Q9H8M5 875 aa18.02■□□□□ 0.48
CDK9-203ENST00000480353 SYNGAP1Q96PV0 1343 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 SLC16A2P36021 539 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 ATN1P54259 1190 aaPredicted RBP18.01■□□□□ 0.47
CDK9-203ENST00000480353 TRDNQ13061 729 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 SYDE2Q5VT97 1194 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 RNF180Q86T96 592 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 UBAC1Q9BSL1 405 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 XPNPEP3Q9NQH7 507 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 PRKAG2Q9UGJ0 569 aa18.01■□□□□ 0.47
CDK9-203ENST00000480353 B4E1Z4 1266 aa18■□□□□ 0.47
CDK9-203ENST00000480353 IGHA2P01877 340 aa18■□□□□ 0.47
CDK9-203ENST00000480353 COL6A1P12109 1028 aa18■□□□□ 0.47
CDK9-203ENST00000480353 SYN1P17600 705 aa18■□□□□ 0.47
CDK9-203ENST00000480353 NOVP48745 357 aa18■□□□□ 0.47
CDK9-203ENST00000480353 RASGRP2Q7LDG7 609 aa18■□□□□ 0.47
CDK9-203ENST00000480353 ZNF467Q7Z7K2 595 aaPredicted RBP18■□□□□ 0.47
CDK9-203ENST00000480353 DGKHQ86XP1 1220 aa18■□□□□ 0.47
CDK9-203ENST00000480353 FAM184BQ9ULE4 1060 aa18■□□□□ 0.47
CDK9-203ENST00000480353 MCM3APO60318 1980 aa18■□□□□ 0.47
CDK9-203ENST00000480353 ICAM1P05362 532 aa17.99■□□□□ 0.47
CDK9-203ENST00000480353 PDHBP11177 359 aa17.99■□□□□ 0.47
CDK9-203ENST00000480353 LRRC26Q2I0M4 334 aa17.99■□□□□ 0.47
CDK9-203ENST00000480353 TTBK2Q6IQ55 1244 aa17.99■□□□□ 0.47
CDK9-203ENST00000480353 NSMFQ6X4W1 530 aa17.99■□□□□ 0.47
CDK9-203ENST00000480353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDK9-203ENST00000480353 SPC25Q9HBM1 224 aa17.99■□□□□ 0.47
CDK9-203ENST00000480353 RBM27Q9P2N5 1060 aaKnown RBP17.99■□□□□ 0.47
CDK9-203ENST00000480353 PNMA2Q9UL42 364 aa17.99■□□□□ 0.47
CDK9-203ENST00000480353 DNAJC25-GNG10A0A024R161 153 aa17.98■□□□□ 0.47
CDK9-203ENST00000480353 TAL1P17542 331 aaPredicted RBP17.98■□□□□ 0.47
CDK9-203ENST00000480353 LRRC41Q15345 812 aa17.98■□□□□ 0.47
CDK9-203ENST00000480353 GPATCH4Q5T3I0 446 aaKnown RBP17.98■□□□□ 0.47
CDK9-203ENST00000480353 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
CDK9-203ENST00000480353 ZSCAN10Q96SZ4 725 aaPredicted RBP17.98■□□□□ 0.47
CDK9-203ENST00000480353 ABHD16BQ9H3Z7 469 aa17.98■□□□□ 0.47
CDK9-203ENST00000480353 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
CDK9-203ENST00000480353 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.98■□□□□ 0.47
CDK9-203ENST00000480353 ATP11BQ9Y2G3 1177 aa17.98■□□□□ 0.47
CDK9-203ENST00000480353 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
CDK9-203ENST00000480353 ZNF536O15090 1300 aa17.98■□□□□ 0.47
CDK9-203ENST00000480353 ASB14A6NK59 587 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 DHX16O60231 1041 aaKnown RBP17.97■□□□□ 0.47
CDK9-203ENST00000480353 ZNF865P0CJ78 1059 aaPredicted RBP17.97■□□□□ 0.47
CDK9-203ENST00000480353 CHMLP26374 656 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 ZNF543Q08ER8 600 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 ACVR2BQ13705 512 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 MAMDC4Q6UXC1 1216 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 BTNL9Q6UXG8 535 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 KIAA1211Q6ZU35 1233 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 NOL8Q76FK4 1167 aaKnown RBP17.97■□□□□ 0.47
CDK9-203ENST00000480353 ARMCX2Q7L311 632 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 FERMT2Q96AC1 680 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 LBHD1Q9BQE6 289 aaPredicted RBP17.97■□□□□ 0.47
CDK9-203ENST00000480353 RANBP17Q9H2T7 1088 aaKnown RBP17.97■□□□□ 0.47
CDK9-203ENST00000480353 TNKSO95271 1327 aa17.97■□□□□ 0.47
CDK9-203ENST00000480353 ERICH2A1L162 156 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 PTPDC1A2A3K4 754 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
CDK9-203ENST00000480353 PGK1P00558 417 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 ADCYAP1R1P41586 468 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 RTP1P59025 263 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 CNTN2Q02246 1040 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
CDK9-203ENST00000480353 RALYLQ86SE5 291 aaKnown RBP17.96■□□□□ 0.47
CDK9-203ENST00000480353 CCDC144CPQ8IYA2 1237 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 MPHOSPH6Q99547 160 aaKnown RBP17.96■□□□□ 0.47
CDK9-203ENST00000480353 ZSWIM5Q9P217 1185 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 MYH6P13533 1939 aa17.96■□□□□ 0.47
CDK9-203ENST00000480353 GOLGA8HP0CJ92 632 aa17.95■□□□□ 0.46
CDK9-203ENST00000480353 MUM1L1Q5H9M0 696 aa17.95■□□□□ 0.46
CDK9-203ENST00000480353 SLC39A5Q6ZMH5 540 aa17.95■□□□□ 0.46
CDK9-203ENST00000480353 A0A1W2PPC1 479 aa17.94■□□□□ 0.46
CDK9-203ENST00000480353 PARP1P09874 1014 aaKnown RBP17.94■□□□□ 0.46
CDK9-203ENST00000480353 SART3Q15020 963 aaKnown RBP17.94■□□□□ 0.46
CDK9-203ENST00000480353 ASPRV1Q53RT3 343 aa17.94■□□□□ 0.46
CDK9-203ENST00000480353 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
CDK9-203ENST00000480353 LENG1Q96BZ8 264 aaPredicted RBP17.94■□□□□ 0.46
CDK9-203ENST00000480353 UBE2OQ9C0C9 1292 aaKnown RBP17.94■□□□□ 0.46
CDK9-203ENST00000480353 PRDM5Q9NQX1 630 aaPredicted RBP17.94■□□□□ 0.46
CDK9-203ENST00000480353 CYP39A1Q9NYL5 469 aa17.94■□□□□ 0.46
CDK9-203ENST00000480353 ADD3Q9UEY8 706 aaKnown RBP17.94■□□□□ 0.46
CDK9-203ENST00000480353 DUSP11O75319 330 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms