RNA–Protein interactions for RNA: ENST00000475141.2

FRMD4A-204, Transcript of FERM domain containing 4A, humanhuman

TSL 1 (best) BASIC

Gene FRMD4A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-204ENST00000475141 FEM1BQ9UK73 627 aa16.33■□□□□ 0.2
FRMD4A-204ENST00000475141 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.2
FRMD4A-204ENST00000475141 COLQQ9Y215 455 aaPredicted RBP16.33■□□□□ 0.2
FRMD4A-204ENST00000475141 CCDC196A0A1B0GTZ2 297 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 TMEM232C9JQI7 657 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 RXRAP19793 462 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 MCM2P49736 904 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 GNAQP50148 359 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 EVCP57679 992 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 PPP2R5BQ15173 497 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 RTN1Q16799 776 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 CATSPERGQ6ZRH7 1159 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 RAB11FIP4Q86YS3 637 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 CCDC144CPQ8IYA2 1237 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 ZNF274Q96GC6 653 aaPredicted RBP16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 SLF1Q9BQI6 1058 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 GPCPD1Q9NPB8 672 aa16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
FRMD4A-204ENST00000475141 MYPNQ86TC9 1320 aa16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 DHX16O60231 1041 aaKnown RBP16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 CTGFP29279 349 aa16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 FANCBQ8NB91 859 aa16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 GTF3C2Q8WUA4 911 aaPredicted RBP16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 ASCC2Q9H1I8 757 aaPredicted RBP16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 PCDHB8Q9UN66 801 aa16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
FRMD4A-204ENST00000475141 NID2Q14112 1375 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 H0YGN5 161 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 PLA2G6O60733 806 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 PDIA3P30101 505 aaKnown RBP16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 PSMC4P43686 418 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 COG2Q14746 738 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 MTFR1Q15390 333 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 C17orf99Q6UX52 265 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 ZNF467Q7Z7K2 595 aaPredicted RBP16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 MAD2L2Q9UI95 211 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 PPP1R9AQ9ULJ8 1098 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 TPCN1Q9ULQ1 816 aa16.3■□□□□ 0.2
FRMD4A-204ENST00000475141 PARP14Q460N5 1801 aa16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 PALM3A6NDB9 673 aaPredicted RBP16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 CPLX1O14810 134 aa16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 STK3Q13188 491 aa16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 SYDE2Q5VT97 1194 aa16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 CPLX2Q6PUV4 134 aaKnown RBP16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 TRIM47Q96LD4 638 aa16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 ZSCAN31Q96LW9 406 aaPredicted RBP16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 FBXO28Q9NVF7 368 aa16.29■□□□□ 0.2
FRMD4A-204ENST00000475141 FDX1P10109 184 aa16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 CYP2C8P10632 490 aa16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 SLC16A2P36021 539 aa16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 HERVK_113P62684 666 aa16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 CCT2P78371 535 aaKnown RBP16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 BTNL9Q6UXG8 535 aa16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 STAG2Q8N3U4 1231 aa16.28■□□□□ 0.2
FRMD4A-204ENST00000475141 SPDYE16A6NNV3 312 aaPredicted RBP16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 PFKFB2O60825 505 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 ZBED4O75132 1171 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 GNRH1P01148 92 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 GCLCP48506 637 aaPredicted RBP16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 TMTC3Q6ZXV5 915 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 MB21D1Q8N884 522 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 RAET1EQ8TD07 263 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 DPF3Q92784 378 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 ATG4CQ96DT6 458 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 SRRDQ9UH36 339 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.2
FRMD4A-204ENST00000475141 A0A0G2JMZ2 1700 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 CDKL5O76039 1030 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 PLEKHA8P1O95397 391 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 SMARCA1P28370 1054 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 PRMT2P55345 433 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 ME3Q16798 604 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 LBX2Q6XYB7 198 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 SPZ1Q9BXG8 430 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 NCOA5Q9HCD5 579 aaKnown RBP16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 BIN2Q9UBW5 565 aaPredicted RBP16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 SEC63Q9UGP8 760 aaKnown RBP16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 CEP290O15078 2479 aa16.26■□□□□ 0.19
FRMD4A-204ENST00000475141 RLFQ13129 1914 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms