RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 BARHL2Q9NY43 387 aa20.09■□□□□ 0.81
MCF2L-221ENST00000469415 DDX41Q9UJV9 622 aaKnown RBP20.09■□□□□ 0.81
MCF2L-221ENST00000469415 KLK7P49862 253 aa20.08■□□□□ 0.81
MCF2L-221ENST00000469415 ST5P78524 1137 aa20.08■□□□□ 0.81
MCF2L-221ENST00000469415 SHROOM1Q2M3G4 852 aaPredicted RBP20.08■□□□□ 0.81
MCF2L-221ENST00000469415 OGFRQ9NZT2 677 aa20.08■□□□□ 0.81
MCF2L-221ENST00000469415 MFAP3LO75121 409 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 TNNI2P48788 182 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 UBE2SQ16763 222 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 CABP7Q86V35 215 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 POTEDQ86YR6 584 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 TBC1D16Q8TBP0 767 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 BBXQ8WY36 941 aaPredicted RBP20.08■□□□□ 0.8
MCF2L-221ENST00000469415 PCDHAC2Q9Y5I4 1007 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 SSBP05455 408 aaKnown RBP eCLIP20.08■□□□□ 0.8
MCF2L-221ENST00000469415 TPM1P09493 284 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 IDEP14735 1019 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 KIF4BQ2VIQ3 1234 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 MSL1Q68DK7 614 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 TTBK2Q6IQ55 1244 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 RRP36Q96EU6 259 aaKnown RBP20.08■□□□□ 0.8
MCF2L-221ENST00000469415 TCP11L1Q9NUJ3 509 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 ADGRG1Q9Y653 693 aa20.08■□□□□ 0.8
MCF2L-221ENST00000469415 AHDC1Q5TGY3 1603 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-221ENST00000469415 AKR1B1P15121 316 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 LONP1P36776 959 aaKnown RBP20.07■□□□□ 0.8
MCF2L-221ENST00000469415 PPP2R3AQ06190 1150 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 PDE4DQ08499 809 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 TCP11X2Q5H9J9 407 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 ZNF658Q5TYW1 1059 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-221ENST00000469415 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-221ENST00000469415 ANKRD20A12PQ8NF67 263 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 CCDC148Q8NFR7 591 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 SLC39A2Q9NP94 309 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 KCNQ5Q9NR82 932 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 IRS2Q9Y4H2 1338 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 TRAPPC10P48553 1259 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 GNAQP50148 359 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 RAD51AP2Q09MP3 1159 aa20.07■□□□□ 0.8
MCF2L-221ENST00000469415 ZNF771Q7L3S4 317 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-221ENST00000469415 ELOA2Q8IYF1 753 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-221ENST00000469415 GJD4Q96KN9 370 aaPredicted RBP20.07■□□□□ 0.8
MCF2L-221ENST00000469415 PALM3A6NDB9 673 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-221ENST00000469415 B4DLN1 442 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 POLR3GO15318 223 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-221ENST00000469415 MARCH6O60337 910 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 ERVK-24P63145 666 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 GUCA1BQ9UMX6 200 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 TTF2Q9UNY4 1162 aaKnown RBP20.06■□□□□ 0.8
MCF2L-221ENST00000469415 PHLPP2Q6ZVD8 1323 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 POTEMA6NI47 508 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 SNAP25P60880 206 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 DDR1Q08345 913 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 STK4Q13043 487 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 NONOQ15233 471 aaKnown RBP eCLIP20.06■□□□□ 0.8
MCF2L-221ENST00000469415 CCDC96Q2M329 555 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 KCTD1Q719H9 257 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 HINFPQ9BQA5 517 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 KCND1Q9NSA2 647 aa20.06■□□□□ 0.8
MCF2L-221ENST00000469415 TDP2O95551 362 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 RBM5P52756 815 aaKnown RBP eCLIP20.05■□□□□ 0.8
MCF2L-221ENST00000469415 CTAGE1Q96RT6 745 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 VGLL3A8MV65 326 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 RHBDL3P58872 404 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 SMAP1Q8IYB5 467 aaPredicted RBP20.05■□□□□ 0.8
MCF2L-221ENST00000469415 DDX4Q9NQI0 724 aaKnown RBP20.05■□□□□ 0.8
MCF2L-221ENST00000469415 DAGLAQ9Y4D2 1042 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 SYCP1Q15431 976 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 CSGALNACT2Q8N6G5 542 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 RBM17Q96I25 401 aaKnown RBP20.05■□□□□ 0.8
MCF2L-221ENST00000469415 FEZ1Q99689 392 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 C6orf50Q9HD87 102 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 RWDD2AQ9UIY3 292 aa20.05■□□□□ 0.8
MCF2L-221ENST00000469415 ENC1O14682 589 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 OR52Z1P0C646 297 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 LRRC41Q15345 812 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 SLC35F6Q8N357 371 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 MYO1BO43795 1136 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 KIF5CO60282 957 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 TAL1P17542 331 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-221ENST00000469415 KCNJ6P48051 423 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 IRF2BP1Q8IU81 584 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 DBNDD1Q9H9R9 158 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 TBC1D7Q9P0N9 293 aa20.04■□□□□ 0.8
MCF2L-221ENST00000469415 TTC26A0AVF1 554 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 TADA3O75528 432 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 ZSCAN29Q8IWY8 852 aaPredicted RBP20.03■□□□□ 0.8
MCF2L-221ENST00000469415 REXO1Q8N1G1 1221 aaKnown RBP20.03■□□□□ 0.8
MCF2L-221ENST00000469415 GPR75-ASB3A0A0A6YYF3 556 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 ERICH4A6NGS2 130 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 PPP4CP60510 307 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 CACNB1Q02641 598 aaPredicted RBP20.03■□□□□ 0.8
MCF2L-221ENST00000469415 ARL6IP4Q66PJ3 421 aaKnown RBP20.03■□□□□ 0.8
MCF2L-221ENST00000469415 POLD4Q9HCU8 107 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 USP40Q9NVE5 1235 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 MAGEC2Q9UBF1 373 aaPredicted RBP20.03■□□□□ 0.8
MCF2L-221ENST00000469415 AFF2P51816 1311 aa20.03■□□□□ 0.8
MCF2L-221ENST00000469415 RHOXF2BP0C7M4 288 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 ATP2B4P23634 1241 aa20.02■□□□□ 0.8
MCF2L-221ENST00000469415 MCM6Q14566 821 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms