RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZBTB5O15062 677 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 DHX16O60231 1041 aaKnown RBP18.56■□□□□ 0.56
GPC1-207ENST00000466624 SLC25A27O95847 323 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 ICAM1P05362 532 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 ADD1P35611 737 aaKnown RBP18.56■□□□□ 0.56
GPC1-207ENST00000466624 STAT3P40763 770 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 CCT2P78371 535 aaKnown RBP18.56■□□□□ 0.56
GPC1-207ENST00000466624 FUT2Q10981 343 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 NTRK3Q16288 839 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 CDC37Q16543 378 aaPredicted RBP18.56■□□□□ 0.56
GPC1-207ENST00000466624 Q3C1V9 767 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 RIOX2Q8IUF8 465 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 SMCHD1A6NHR9 2005 aa18.56■□□□□ 0.56
GPC1-207ENST00000466624 FKTNO75072 461 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 LARGE1O95461 756 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 IFNAR1P17181 557 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 SCRN1Q12765 414 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 TRAF1Q13077 416 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 STK3Q13188 491 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 QRICH1Q2TAL8 776 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 TKFCQ3LXA3 575 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 CPLX2Q6PUV4 134 aaKnown RBP18.55■□□□□ 0.56
GPC1-207ENST00000466624 NOL8Q76FK4 1167 aaKnown RBP18.55■□□□□ 0.56
GPC1-207ENST00000466624 GTF3C6Q969F1 213 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
GPC1-207ENST00000466624 MOV10L1Q9BXT6 1211 aaKnown RBP18.55■□□□□ 0.56
GPC1-207ENST00000466624 RAVER2Q9HCJ3 691 aaKnown RBP18.55■□□□□ 0.56
GPC1-207ENST00000466624 RBM27Q9P2N5 1060 aaKnown RBP18.55■□□□□ 0.56
GPC1-207ENST00000466624 PLXNB2O15031 1838 aa18.55■□□□□ 0.56
GPC1-207ENST00000466624 RBBP6Q7Z6E9 1792 aaKnown RBP18.55■□□□□ 0.56
GPC1-207ENST00000466624 ZNF236Q9UL36 1845 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 PNMA6FA0A0J9YX94 578 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 CPLX1O14810 134 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 FOXN1O15353 648 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 HSPA8P11142 646 aaKnown RBP18.54■□□□□ 0.56
GPC1-207ENST00000466624 MAPK4P31152 587 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 CTCFP49711 727 aaPredicted RBP18.54■□□□□ 0.56
GPC1-207ENST00000466624 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
GPC1-207ENST00000466624 SNRNP48Q6IEG0 339 aaKnown RBP18.54■□□□□ 0.56
GPC1-207ENST00000466624 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.54■□□□□ 0.56
GPC1-207ENST00000466624 CMTR1Q8N1G2 835 aaKnown RBP18.54■□□□□ 0.56
GPC1-207ENST00000466624 PIGSQ96S52 555 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 MROH8Q9H579 483 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 NCOA5Q9HCD5 579 aaKnown RBP18.54■□□□□ 0.56
GPC1-207ENST00000466624 VAT1LQ9HCJ6 419 aa18.54■□□□□ 0.56
GPC1-207ENST00000466624 PEX10O60683 326 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 CDKL5O76039 1030 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 CD2BP2O95400 341 aaKnown RBP18.53■□□□□ 0.56
GPC1-207ENST00000466624 PLS1Q14651 629 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 KIF22Q14807 665 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 CCDC174Q6PII3 467 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 CPXCR1Q8N123 301 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 ZNF296Q8WUU4 475 aaPredicted RBP18.53■□□□□ 0.56
GPC1-207ENST00000466624 ERO1AQ96HE7 468 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 AMNQ9BXJ7 453 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 RNF26Q9BY78 433 aaPredicted RBP18.53■□□□□ 0.56
GPC1-207ENST00000466624 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
GPC1-207ENST00000466624 TSKSQ9UJT2 592 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 CCPG1Q9ULG6 757 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 ZSWIM8A7E2V4 1837 aa18.53■□□□□ 0.56
GPC1-207ENST00000466624 ZNFX1Q9P2E3 1918 aaKnown RBP18.53■□□□□ 0.56
GPC1-207ENST00000466624 DOCK3Q8IZD9 2030 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 hCG_1984214I3L0E3 225 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 PRPF3O43395 683 aaKnown RBP18.52■□□□□ 0.56
GPC1-207ENST00000466624 SNAP25P60880 206 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 FBXO11Q86XK2 927 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 HOMER1Q86YM7 354 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 CCDC82Q8N4S0 544 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 ZNF713Q8N859 430 aaPredicted RBP18.52■□□□□ 0.56
GPC1-207ENST00000466624 CHST13Q8NET6 341 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 SNX21Q969T3 373 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 AGBL1Q96MI9 1066 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 MAF1Q9H063 256 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 PORCNQ9H237 461 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 FBXO40Q9UH90 709 aa18.52■□□□□ 0.56
GPC1-207ENST00000466624 CASP8AP2Q9UKL3 1982 aa18.51■□□□□ 0.55
GPC1-207ENST00000466624 ABCB11O95342 1321 aa18.51■□□□□ 0.55
GPC1-207ENST00000466624 GNRH1P01148 92 aa18.51■□□□□ 0.55
GPC1-207ENST00000466624 ERCC3P19447 782 aa18.51■□□□□ 0.55
GPC1-207ENST00000466624 FCGRTP55899 365 aa18.51■□□□□ 0.55
GPC1-207ENST00000466624 ARHGEF6Q15052 776 aa18.51■□□□□ 0.55
GPC1-207ENST00000466624 CCAR1Q8IX12 1150 aaKnown RBP18.51■□□□□ 0.55
GPC1-207ENST00000466624 STK36Q9NRP7 1315 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 PPP1R11O60927 126 aaPredicted RBP18.5■□□□□ 0.55
GPC1-207ENST00000466624 FMNL1O95466 1100 aaPredicted RBP18.5■□□□□ 0.55
GPC1-207ENST00000466624 ST3GAL1Q11201 340 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 NCAPG2Q86XI2 1143 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 TRIM22Q8IYM9 498 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 ABRAQ8N0Z2 381 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 NECAB1Q8N987 351 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 TMX3Q96JJ7 454 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 LLPHQ9BRT6 129 aaKnown RBP18.5■□□□□ 0.55
GPC1-207ENST00000466624 ACAD9Q9H845 621 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 EFCC1Q9HA90 598 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 RIPK3Q9Y572 518 aa18.5■□□□□ 0.55
GPC1-207ENST00000466624 V9GY48 417 aaPredicted RBP18.5■□□□□ 0.55
GPC1-207ENST00000466624 STRNO43815 780 aa18.49■□□□□ 0.55
GPC1-207ENST00000466624 ALAS1P13196 640 aa18.49■□□□□ 0.55
GPC1-207ENST00000466624 PSMC4P43686 418 aa18.49■□□□□ 0.55
GPC1-207ENST00000466624 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms