RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CNTNAP1P78357 1384 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 FANCGO15287 622 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 CHGBP05060 677 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 INPP5BP32019 993 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 GNG11P61952 73 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 ICA1Q05084 483 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 TCP10Q12799 353 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 MCM6Q14566 821 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 PLCB4Q15147 1175 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 LCORLQ8N3X6 602 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 OSBP2Q969R2 916 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 CDCA5Q96FF9 252 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAXDC2Q96IV6 333 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM204AQ9H8W3 233 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 ARMT1Q9H993 441 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 CDC23Q9UJX2 597 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 H0YHG0 523 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 TRAF5O00463 557 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 GNAT2P19087 354 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 SARNPP82979 210 aaKnown RBP12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 YTHDF3Q7Z739 585 aaKnown RBP12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 TGFBRAP1Q8WUH2 860 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 ZNF396Q96N95 335 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 PASKQ96RG2 1323 aa12.92□□□□□ -0.34
TRAPPC3-205ENST00000462715 A0A1W2PQ27 194 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 A0A1W2PQ64 194 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 A0A1W2PQD8 194 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 GPAA1O43292 621 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 PRPF6O94906 941 aaKnown RBP12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 NECTIN1Q15223 517 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 CCDC50Q8IVM0 306 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 PAGR1Q9BTK6 254 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 TMEM39BQ9GZU3 492 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 TFIP11Q9UBB9 837 aaKnown RBP12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 FLT1P17948 1338 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 M0R2C6 588 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 NLRP12P59046 1061 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 NMIQ13287 307 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 PPP2R5AQ15172 486 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 MCMDC2Q4G0Z9 681 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 MAPKAPK5Q8IW41 473 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 IL25Q9H293 177 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 DDX4Q9NQI0 724 aaKnown RBP12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 ATP8A2Q9NTI2 1148 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 TPCN1Q9ULQ1 816 aa12.91□□□□□ -0.34
TRAPPC3-205ENST00000462715 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 SCRN1Q12765 414 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 FERMT3Q86UX7 667 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 VSTM4Q8IW00 320 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 FAM227BQ96M60 508 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 DHX36Q9H2U1 1008 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 ZNF408Q9H9D4 720 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 GGA2Q9UJY4 613 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 A0A0D9SFI3 127 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 CELF2O95319 508 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 ARHGAP25P42331 645 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 FANCCQ00597 558 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 WHAMMP3Q1A5X7 153 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 TMEM139Q8IV31 216 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 SEC62Q99442 399 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
TRAPPC3-205ENST00000462715 ATRNL1Q5VV63 1379 aa12.9□□□□□ -0.35
TRAPPC3-205ENST00000462715 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 C1QTNF8P60827 252 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 CWC27Q6UX04 472 aaKnown RBP12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 TEPSINQ96N21 525 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 KIAA1468Q9P260 1216 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 TRPM7Q96QT4 1865 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 RNF40O75150 1001 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 HLA-DOAP06340 250 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 FNTAP49354 379 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 PPFIA1Q13136 1202 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 NBPF12Q5TAG4 269 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 DCAF15Q66K64 600 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 DLK2Q6UY11 383 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 SDR42E1Q8WUS8 393 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 DHX58Q96C10 678 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 NACAP1Q9BZK3 213 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 EPC1Q9H2F5 836 aa12.89□□□□□ -0.35
TRAPPC3-205ENST00000462715 A0A1B0GUA9 196 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 LIG3P49916 1009 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 FKBP1BP68106 108 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 DRP2Q13474 957 aa12.88□□□□□ -0.35
TRAPPC3-205ENST00000462715 NCAPHQ15003 741 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms