RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	SEC23A	Q15436	765 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	PRPF38A	Q8NAV1	312 aa	Known RBP	11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	SLF1	Q9BQI6	1058 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	SPATC1L	Q9H0A9	340 aa		11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	ZNF214	Q9UL59	606 aa	Predicted RBP	11.67	□□□□□ -0.54
CHEK2-221	ENST00000456369	RLF	Q13129	1914 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	ZSWIM8	A7E2V4	1837 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	POTEM	A6NI47	508 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	ATP2A1	O14983	1001 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	HOXD10	P28358	340 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	MAPK4	P31152	587 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	FLT3LG	P49771	235 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	ANTXR2	P58335	489 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	TRDN	Q13061	729 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	TSGA10IP	Q3SY00	556 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	CCDC178	Q5BJE1	867 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	POTEG	Q6S5H5	508 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	NCOA7	Q8NI08	942 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	DCAF4	Q8WV16	495 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	USP6NL	Q92738	828 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	KCNB2	Q92953	911 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	ARMC5	Q96C12	935 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	SLC38A10	Q9HBR0	1119 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369		A0A0G2JMZ2	1700 aa		11.66	□□□□□ -0.54
CHEK2-221	ENST00000456369	TMEM232	C9JQI7	657 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	STAT2	P52630	851 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	CCNA1	P78396	465 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	MORN1	Q5T089	497 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	BTNL9	Q6UXG8	535 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	KCTD1	Q719H9	257 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	GPR142	Q7Z601	462 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	SHCBP1	Q8NEM2	672 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	IGDCC4	Q8TDY8	1250 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	KIFC2	Q96AC6	838 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	COA7	Q96BR5	231 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	UBAC1	Q9BSL1	405 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	USP26	Q9BXU7	913 aa		11.65	□□□□□ -0.54
CHEK2-221	ENST00000456369	ERCC3	P19447	782 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	HSPA4	P34932	840 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	ZNF543	Q08ER8	600 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	GRB14	Q14449	540 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	RABEP1	Q15276	862 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	VARS2	Q5ST30	1063 aa	Known RBP	11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	TTBK2	Q6IQ55	1244 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	CHST3	Q7LGC8	479 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	PLEKHH3	Q7Z736	793 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	RALYL	Q86SE5	291 aa	Known RBP	11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	FAM160B2	Q86V87	743 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	HSCB	Q8IWL3	235 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	PNMA1	Q8ND90	353 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	PXYLP1	Q8TE99	480 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	CHURC1	Q8WUH1	139 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	SOCS4	Q8WXH5	440 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	CHMP4C	Q96CF2	233 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	ZNF333	Q96JL9	665 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	MTA3	Q9BTC8	594 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	SENP2	Q9HC62	589 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	PRR12	Q9ULL5	1215 aa		11.64	□□□□□ -0.55
CHEK2-221	ENST00000456369	ZNF536	O15090	1300 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	IGHA2	P01877	340 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	XRCC5	P13010	732 aa	Known RBP	11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	PTPRE	P23469	700 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	STAT3	P40763	770 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	OAZ1	P54368	228 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	ANAPC15	P60006	121 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	IFIT1B	Q5T764	474 aa	Known RBP	11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	IFFO2	Q5TF58	517 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	RNF20	Q5VTR2	975 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	RIOX2	Q8IUF8	465 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	RAET1E	Q8TD07	263 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	SH3TC2	Q8TF17	1288 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	IL17RA	Q96F46	866 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	TEX13B	Q9BXU2	312 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	MROH8	Q9H579	483 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	KAT14	Q9H8E8	782 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	MTMR7	Q9Y216	660 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	RIPK3	Q9Y572	518 aa		11.63	□□□□□ -0.55
CHEK2-221	ENST00000456369	SLC15A5	A6NIM6	579 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	IFIT3	O14879	490 aa	Known RBP	11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	PRC1	O43663	620 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	STRN	O43815	780 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	ADCY3	O60266	1144 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	ZBED4	O75132	1171 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	SLC25A27	O95847	323 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	HOXC6	P09630	235 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	FDX1	P10109	184 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	GRK4	P32298	578 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	MCM5	P33992	734 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	SLC16A2	P36021	539 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	TROAP	Q12815	778 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	MAP2K5	Q13163	448 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	PLS1	Q14651	629 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	CCDC96	Q2M329	555 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	ADCK5	Q3MIX3	580 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	SLC9C1	Q4G0N8	1177 aa		11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	GPATCH4	Q5T3I0	446 aa	Known RBP	11.62	□□□□□ -0.55
CHEK2-221	ENST00000456369	CCAR1	Q8IX12	1150 aa	Known RBP	11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms