RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 IGKV6D-41A0A0C4DH26 115 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 PPP4R3BQ5MIZ7 849 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 ARMCX2Q7L311 632 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 SIRT2Q8IXJ6 389 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 PBX4Q9BYU1 374 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 PUS7LQ9H0K6 701 aaKnown RBP17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 THEGQ9P2T0 379 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 MSRAQ9UJ68 235 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 RIPK3Q9Y572 518 aa17.07■□□□□ 0.32
LYSMD3-202ENST00000453259 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 MUC3AQ02505 3323 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 SMIM22K7EJ46 135 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 CD4P01730 458 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 CSF2RAP15509 400 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 C16orf59Q7L2K0 433 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 USP38Q8NB14 1042 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 SLC43A3Q8NBI5 491 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 HERVK_113Q902F9 699 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 VTI1AQ96AJ9 217 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 NUP88Q99567 741 aaPredicted RBP17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 LRRCC1Q9C099 1032 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 IL23AQ9NPF7 189 aa17.06■□□□□ 0.32
LYSMD3-202ENST00000453259 MYADML2A6NDP7 307 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 ASB14A6NK59 587 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 TTLL1O95922 423 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 LRRFIP1Q32MZ4 808 aaKnown RBP17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 TKFCQ3LXA3 575 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 SLFNL1Q499Z3 407 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 APPBP2Q92624 585 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 KIFC2Q96AC6 838 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 ASB2Q96Q27 587 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 ACAD9Q9H845 621 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 MTMR4Q9NYA4 1195 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
LYSMD3-202ENST00000453259 ZEB2O60315 1214 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 MRPS5P82675 430 aaKnown RBP17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 ZNF365Q70YC5 407 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 ZNF444Q8N0Y2 327 aaPredicted RBP17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 FAM133AQ8N9E0 248 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 FGD4Q96M96 766 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 KATNBL1Q9H079 304 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 RAVER2Q9HCJ3 691 aaKnown RBP17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 Q9Y3F1 56 aa17.04■□□□□ 0.32
LYSMD3-202ENST00000453259 CTAGE5O15320 804 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 ADCY6O43306 1168 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 PLA2G6O60733 806 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 BMP3P12645 472 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 STAT2P52630 851 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 TNFAIP2Q03169 654 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 CHURC1Q8WUH1 139 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 GMCL1Q96IK5 515 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 SLC28A3Q9HAS3 691 aa17.03■□□□□ 0.32
LYSMD3-202ENST00000453259 MYH4Q9Y623 1939 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 FGBP02675 491 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 SLC3A2P08195 630 aaKnown RBP17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 PFKMP08237 780 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 PDE4BQ07343 736 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 RPUSD2Q8IZ73 545 aaKnown RBP17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 IL27Q8NEV9 243 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 NACAP1Q9BZK3 213 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 PPP1R12CQ9BZL4 782 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 AP5M1Q9H0R1 490 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 PRDM12Q9H4Q4 367 aa17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
LYSMD3-202ENST00000453259 LOC102724159A0A0B4J2E5 919 aa17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 PBX2P40425 430 aa17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 TDO2P48775 406 aa17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 PWP2Q15269 919 aaKnown RBP17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 FSCN1Q16658 493 aaKnown RBP17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 TLK2Q86UE8 772 aa17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 NEDD1Q8NHV4 660 aa17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 COG6Q9Y2V7 657 aa17.01■□□□□ 0.31
LYSMD3-202ENST00000453259 CHD9Q3L8U1 2897 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
LYSMD3-202ENST00000453259 GPAA1O43292 621 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 CHGBP05060 677 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 SLC4A3P48751 1232 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 ITGA7Q13683 1181 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 AAK1Q2M2I8 961 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 SLFN13Q68D06 897 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 IQSEC1Q6DN90 963 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 ADAMTS19Q8TE59 1207 aa17■□□□□ 0.31
LYSMD3-202ENST00000453259 A1CFQ9NQ94 594 aaKnown RBP17■□□□□ 0.31
LYSMD3-202ENST00000453259 MCM3APO60318 1980 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 GRXCR1A8MXD5 290 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 TSPY3P0CV98 308 aa16.99■□□□□ 0.31
LYSMD3-202ENST00000453259 TSPY8P0CW00 308 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms