RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 ARL6IP4Q66PJ3 421 aaKnown RBP21.41■■□□□ 1.02
POLR1E-203ENST00000442009 NUP88Q99567 741 aaPredicted RBP21.41■■□□□ 1.02
POLR1E-203ENST00000442009 SYT17Q9BSW7 474 aa21.41■■□□□ 1.02
POLR1E-203ENST00000442009 GPRC5DQ9NZD1 345 aa21.41■■□□□ 1.02
POLR1E-203ENST00000442009 KIAA1468Q9P260 1216 aa21.41■■□□□ 1.02
POLR1E-203ENST00000442009 IL17AQ16552 155 aa21.4■■□□□ 1.02
POLR1E-203ENST00000442009 INF2Q27J81 1249 aa21.4■■□□□ 1.02
POLR1E-203ENST00000442009 QRICH1Q2TAL8 776 aa21.4■■□□□ 1.02
POLR1E-203ENST00000442009 LONRF3Q496Y0 759 aa21.4■■□□□ 1.02
POLR1E-203ENST00000442009 USP49Q70CQ1 688 aa21.4■■□□□ 1.02
POLR1E-203ENST00000442009 REXO1Q8N1G1 1221 aaKnown RBP21.4■■□□□ 1.02
POLR1E-203ENST00000442009 DEFB129Q9H1M3 183 aa21.4■■□□□ 1.02
POLR1E-203ENST00000442009 RIC8AQ9NPQ8 531 aa21.4■■□□□ 1.02
POLR1E-203ENST00000442009 H7C1D1 291 aa21.39■■□□□ 1.02
POLR1E-203ENST00000442009 MCM7P33993 719 aa21.39■■□□□ 1.02
POLR1E-203ENST00000442009 CLK2P49760 499 aaKnown RBP21.39■■□□□ 1.02
POLR1E-203ENST00000442009 FAM13BQ9NYF5 915 aa21.39■■□□□ 1.02
POLR1E-203ENST00000442009 CAVIN2O95810 425 aa21.39■■□□□ 1.01
POLR1E-203ENST00000442009 ASNSP08243 561 aa21.39■■□□□ 1.01
POLR1E-203ENST00000442009 ADCY7P51828 1080 aa21.39■■□□□ 1.01
POLR1E-203ENST00000442009 NONOQ15233 471 aaKnown RBP eCLIP21.39■■□□□ 1.01
POLR1E-203ENST00000442009 ANO6Q4KMQ2 910 aa21.39■■□□□ 1.01
POLR1E-203ENST00000442009 KRBA2Q6ZNG9 492 aa21.39■■□□□ 1.01
POLR1E-203ENST00000442009 FAM200AQ8TCP9 573 aa21.39■■□□□ 1.01
POLR1E-203ENST00000442009 PDLIM2Q96JY6 352 aa21.39■■□□□ 1.01
POLR1E-203ENST00000442009 EDIL3O43854 480 aa21.38■■□□□ 1.01
POLR1E-203ENST00000442009 RAD21O60216 631 aa21.38■■□□□ 1.01
POLR1E-203ENST00000442009 MDM2Q00987 491 aaPredicted RBP21.38■■□□□ 1.01
POLR1E-203ENST00000442009 GINM1Q9NU53 330 aa21.38■■□□□ 1.01
POLR1E-203ENST00000442009 BIN2Q9UBW5 565 aaPredicted RBP21.38■■□□□ 1.01
POLR1E-203ENST00000442009 TMEM232C9JQI7 657 aa21.37■■□□□ 1.01
POLR1E-203ENST00000442009 CDC37Q16543 378 aaPredicted RBP21.37■■□□□ 1.01
POLR1E-203ENST00000442009 SYDE2Q5VT97 1194 aa21.37■■□□□ 1.01
POLR1E-203ENST00000442009 TMEM260Q9NX78 707 aa21.37■■□□□ 1.01
POLR1E-203ENST00000442009 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.37■■□□□ 1.01
POLR1E-203ENST00000442009 TUBE1Q9UJT0 475 aa21.37■■□□□ 1.01
POLR1E-203ENST00000442009 CCDC173Q0VFZ6 552 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 TRPM4Q8TD43 1214 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 ERCC4Q92889 916 aaPredicted RBP21.36■■□□□ 1.01
POLR1E-203ENST00000442009 EPSTI1Q96J88 318 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 VCPKMTQ9H867 229 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 GOPCQ9HD26 462 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 LAD1O00515 517 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 PLA2G6O60733 806 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 MRPL12P52815 198 aaKnown RBP21.36■■□□□ 1.01
POLR1E-203ENST00000442009 ORC2Q13416 577 aaPredicted RBP21.36■■□□□ 1.01
POLR1E-203ENST00000442009 STX1AQ16623 288 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 JAKMIP3Q5VZ66 844 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 NEK8Q86SG6 692 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 SPICE1Q8N0Z3 855 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 TMEM60Q9H2L4 133 aa21.36■■□□□ 1.01
POLR1E-203ENST00000442009 VWA3AA6NCI4 1184 aa21.35■■□□□ 1.01
POLR1E-203ENST00000442009 POLR2DO15514 142 aaKnown RBP21.35■■□□□ 1.01
POLR1E-203ENST00000442009 CTNND1O60716 968 aaKnown RBP21.35■■□□□ 1.01
POLR1E-203ENST00000442009 PRPHP41219 470 aa21.35■■□□□ 1.01
POLR1E-203ENST00000442009 HIRAP54198 1017 aaPredicted RBP21.35■■□□□ 1.01
POLR1E-203ENST00000442009 NBPF12Q5TAG4 269 aaPredicted RBP21.35■■□□□ 1.01
POLR1E-203ENST00000442009 TBCKQ8TEA7 893 aa21.35■■□□□ 1.01
POLR1E-203ENST00000442009 GLIS2Q9BZE0 524 aaPredicted RBP21.35■■□□□ 1.01
POLR1E-203ENST00000442009 SH2D4AQ9H788 454 aa21.35■■□□□ 1.01
POLR1E-203ENST00000442009 CBX8Q9HC52 389 aa21.35■■□□□ 1.01
POLR1E-203ENST00000442009 PRR12Q9ULL5 1215 aa21.35■■□□□ 1.01
POLR1E-203ENST00000442009 PCDHA1Q9Y5I3 950 aa21.35■■□□□ 1.01
POLR1E-203ENST00000442009 A0A087X0B3 334 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 ACTN4O43707 911 aaKnown RBP21.34■■□□□ 1.01
POLR1E-203ENST00000442009 EPS15P42566 896 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 APOBEC3FQ8IUX4 373 aaKnown RBP21.34■■□□□ 1.01
POLR1E-203ENST00000442009 ANP32BQ92688 251 aaKnown RBP21.34■■□□□ 1.01
POLR1E-203ENST00000442009 SYMPKQ92797 1274 aaKnown RBP21.34■■□□□ 1.01
POLR1E-203ENST00000442009 CUL5Q93034 780 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 GLT8D2Q9H1C3 349 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 DNAJC25Q9H1X3 360 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 PSTPIP2Q9H939 334 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 ZNF112Q9UJU3 913 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 SMCHD1A6NHR9 2005 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 POLR2AP24928 1970 aaKnown RBP21.34■■□□□ 1.01
POLR1E-203ENST00000442009 YBX3P16989 372 aaKnown RBP eCLIP21.34■■□□□ 1.016e-7■■■□□ 14.8
POLR1E-203ENST00000442009 LONP1P36776 959 aaKnown RBP21.34■■□□□ 1.01
POLR1E-203ENST00000442009 ANGEL2Q5VTE6 544 aaKnown RBP21.34■■□□□ 1.01
POLR1E-203ENST00000442009 CNNM3Q8NE01 707 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 AMNQ9BXJ7 453 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 ANO10Q9NW15 660 aa21.34■■□□□ 1.01
POLR1E-203ENST00000442009 MYH7BA7E2Y1 1941 aa21.33■■□□□ 1.01
POLR1E-203ENST00000442009 ZNF165P49910 485 aa21.33■■□□□ 1.01
POLR1E-203ENST00000442009 IQCB1Q15051 598 aa21.33■■□□□ 1.01
POLR1E-203ENST00000442009 SERTAD1Q9UHV2 236 aa21.33■■□□□ 1.01
POLR1E-203ENST00000442009 SRCAPQ6ZRS2 3230 aa21.33■■□□□ 1
POLR1E-203ENST00000442009 STAT2P52630 851 aa21.32■■□□□ 1
POLR1E-203ENST00000442009 FAM83BQ5T0W9 1011 aa21.32■■□□□ 1
POLR1E-203ENST00000442009 C11orf57Q6ZUT1 292 aaPredicted RBP21.32■■□□□ 1
POLR1E-203ENST00000442009 UBE2SQ16763 222 aa21.32■■□□□ 1
POLR1E-203ENST00000442009 LETM2Q2VYF4 491 aa21.32■■□□□ 1
POLR1E-203ENST00000442009 SH3RF1Q7Z6J0 888 aa21.32■■□□□ 1
POLR1E-203ENST00000442009 CCDC84Q86UT8 332 aaPredicted RBP21.32■■□□□ 1
POLR1E-203ENST00000442009 FBXO11Q86XK2 927 aa21.32■■□□□ 1
POLR1E-203ENST00000442009 A0A087WWV3 80 aa21.31■■□□□ 1
POLR1E-203ENST00000442009 MEIS2O14770 477 aa21.31■■□□□ 1
POLR1E-203ENST00000442009 SNAP25P60880 206 aa21.31■■□□□ 1
POLR1E-203ENST00000442009 PNOCQ13519 176 aa21.31■■□□□ 1
POLR1E-203ENST00000442009 E2F4Q16254 413 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms