RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 TTLL1O95922 423 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 HMGCRP04035 888 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 SCYL3Q8IZE3 742 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 FANCBQ8NB91 859 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 PNMA1Q8ND90 353 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 CEP95Q96GE4 821 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 NCOA5Q9HCD5 579 aaKnown RBP13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 FAM217BQ9NTX9 383 aaPredicted RBP13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 GINM1Q9NU53 330 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 SYNPO2Q9UMS6 1093 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 AFG3L2Q9Y4W6 797 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 PFASO15067 1338 aa13.62□□□□□ -0.23
AC009404.1-202ENST00000439955 PHF20L1A8MW92 1017 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 IFNAR1P17181 557 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 CDC27P30260 824 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 KIF5BP33176 963 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 RAB3GAP1Q15042 981 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 NTRK3Q16288 839 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 ABCB5Q2M3G0 1257 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 TREML2Q5T2D2 321 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 CTCFLQ8NI51 663 aaPredicted RBP13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 MYL10Q9BUA6 226 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 NYAP2Q9P242 653 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 STX8Q9UNK0 236 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 EYSQ5T1H1 3165 aa13.61□□□□□ -0.23
AC009404.1-202ENST00000439955 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 GNAQP50148 359 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 GRM4Q14833 912 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 NUP133Q8WUM0 1156 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 MKL1Q969V6 931 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 CABP5Q9NP86 173 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 SLC45A1Q9Y2W3 748 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 MYH4Q9Y623 1939 aa13.6□□□□□ -0.23
AC009404.1-202ENST00000439955 MPHOSPH10O00566 681 aaKnown RBP13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 STX6O43752 255 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 JAK2O60674 1132 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 BRD1O95696 1058 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 SYT1P21579 422 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 ADD1P35611 737 aaKnown RBP13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 LRRC26Q2I0M4 334 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 TRIB2Q92519 343 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 RNF26Q9BY78 433 aaPredicted RBP13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 OGDHLQ9ULD0 1010 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 AGTPBP1Q9UPW5 1226 aa13.59□□□□□ -0.23
AC009404.1-202ENST00000439955 ATAD5Q96QE3 1844 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 RXRAP19793 462 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 CYP2B6P20813 491 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 SMARCA1P28370 1054 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 ICA1Q05084 483 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 FAM109BQ6ICB4 259 aaPredicted RBP13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 TMTC3Q6ZXV5 915 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 CCDC144CPQ8IYA2 1237 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 TRIM22Q8IYM9 498 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 MAFAQ8NHW3 353 aaPredicted RBP13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 WASF1Q92558 559 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 CDX2Q99626 313 aaPredicted RBP13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 LZTS2Q9BRK4 669 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 RAPGEFL1Q9UHV5 662 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 GJD2Q9UKL4 321 aa13.58□□□□□ -0.24
AC009404.1-202ENST00000439955 DOCK1Q14185 1865 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 PEX10O60683 326 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 GH2P01242 217 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 ASNSP08243 561 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 FDPSP14324 419 aaKnown RBP13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 GUCY1A2P33402 732 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 CAP2P40123 477 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 SSRP1Q08945 709 aaKnown RBP13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 FAM110CQ1W6H9 321 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 ASPRV1Q53RT3 343 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 ZNF697Q5TEC3 545 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 LARP1BQ659C4 914 aaKnown RBP13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 POTEHQ6S545 545 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 CLEC17AQ6ZS10 378 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 DDX11Q96FC9 970 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 ZBTB21Q9ULJ3 1066 aa13.57□□□□□ -0.24
AC009404.1-202ENST00000439955 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 CTNND1O60716 968 aaKnown RBP13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 GDF11O95390 407 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 DEXIO95424 95 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 ZSCAN22P10073 491 aaPredicted RBP13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 EEF2P13639 858 aaKnown RBP13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 COL9A1P20849 921 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 FUT2Q10981 343 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 PKP1Q13835 747 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 RRP1BQ14684 758 aaKnown RBP13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 SEPT2Q15019 361 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 SH2D4AQ9H788 454 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 CLIP2Q9UDT6 1046 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 PNMA3Q9UL41 463 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 MTMR6Q9Y217 621 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 ZDHHC9Q9Y397 364 aa13.56□□□□□ -0.24
AC009404.1-202ENST00000439955 CNTNAP5Q8WYK1 1306 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms