RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 VPS53Q5VIR6 699 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
RBM39-209ENST00000416529 RALYLQ86SE5 291 aaKnown RBP9.04□□□□□ -0.96
RBM39-209ENST00000416529 TEX2Q8IWB9 1127 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 ZFPM1Q8IX07 1006 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 PROCA1Q8NCQ7 364 aaPredicted RBP9.04□□□□□ -0.96
RBM39-209ENST00000416529 USP26Q9BXU7 913 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 MAF1Q9H063 256 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 ALDH8A1Q9H2A2 487 aaPredicted RBP9.04□□□□□ -0.96
RBM39-209ENST00000416529 ARHGEF10LQ9HCE6 1279 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 CASP8AP2Q9UKL3 1982 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 DOCK1Q14185 1865 aa9.04□□□□□ -0.96
RBM39-209ENST00000416529 SSC5DA1L4H1 1573 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 TSPY2A6NKD2 308 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 CA12O43570 354 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 PLA2G6O60733 806 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 TTLL1O95922 423 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
RBM39-209ENST00000416529 CETPP11597 493 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 RASA1P20936 1047 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 MCM5P33992 734 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 SNAPC2Q13487 334 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
RBM39-209ENST00000416529 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 CREB3L3Q68CJ9 461 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 CCDC129Q6ZRS4 1044 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
RBM39-209ENST00000416529 ZNF280CQ8ND82 737 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 C12orf42Q96LP6 360 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 MAP3K14Q99558 947 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 CFHR5Q9BXR6 569 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 KIAA1683Q9H0B3 1180 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 DNAJC18Q9H819 358 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 ZNF408Q9H9D4 720 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 SAP30BPQ9UHR5 308 aaKnown RBP9.03□□□□□ -0.96
RBM39-209ENST00000416529 ZBTB21Q9ULJ3 1066 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 MYPNQ86TC9 1320 aa9.03□□□□□ -0.96
RBM39-209ENST00000416529 GREB1LQ9C091 1923 aaPredicted RBP9.02□□□□□ -0.97
RBM39-209ENST00000416529 IGKV6D-41A0A0C4DH26 115 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 USP17L10C9JJH3 530 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 TRAF5O00463 557 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 TERTO14746 1132 aaKnown RBP9.02□□□□□ -0.97
RBM39-209ENST00000416529 SLC27A2O14975 620 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 PTPRAP18433 802 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 LIFRP42702 1097 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 RBM25P49756 843 aaKnown RBP9.02□□□□□ -0.97
RBM39-209ENST00000416529 BACE1P56817 501 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
RBM39-209ENST00000416529 PTH1RQ03431 593 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 NFX1Q12986 1120 aaKnown RBP9.02□□□□□ -0.97
RBM39-209ENST00000416529 TRAF1Q13077 416 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 VGLL4Q14135 290 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 ANKRD1Q15327 319 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 C8orf34Q49A92 452 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 GMCL1P1Q8NEA9 526 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 NEK1Q96PY6 1258 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 UBAC1Q9BSL1 405 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 MTMR4Q9NYA4 1195 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 TMX2Q9Y320 296 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 SNCAIPQ9Y6H5 919 aa9.02□□□□□ -0.97
RBM39-209ENST00000416529 E7EWF7 191 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 ADH1CP00326 375 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 CHGBP05060 677 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 CALM1P0DP23 149 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 CALM2P0DP24 149 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 CALM3P0DP25 149 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 TOP1P11387 765 aaKnown RBP9.01□□□□□ -0.97
RBM39-209ENST00000416529 SMARCA1P28370 1054 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 HOXA7P31268 230 aaPredicted RBP9.01□□□□□ -0.97
RBM39-209ENST00000416529 TM4SF4P48230 202 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 ZNF157P51786 506 aaPredicted RBP9.01□□□□□ -0.97
RBM39-209ENST00000416529 TFAP4Q01664 338 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 ICA1Q05084 483 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 NNTQ13423 1086 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 AGERQ15109 404 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 SLFNL1Q499Z3 407 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 USP17L2Q6R6M4 530 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 MIGA2Q7L4E1 593 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 DHX32Q7L7V1 743 aaKnown RBP9.01□□□□□ -0.97
RBM39-209ENST00000416529 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 NPAS3Q8IXF0 933 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 TSC1Q92574 1164 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 WNK4Q96J92 1243 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 BACH2Q9BYV9 841 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 SLC24A3Q9HC58 644 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 GOPCQ9HD26 462 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 TMOD4Q9NZQ9 345 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 AFG3L2Q9Y4W6 797 aa9.01□□□□□ -0.97
RBM39-209ENST00000416529 A0A0G2JLL6 359 aaPredicted RBP9□□□□□ -0.97
RBM39-209ENST00000416529 UBE2Q2LH0YL09 131 aa9□□□□□ -0.97
RBM39-209ENST00000416529 WDR46O15213 610 aaKnown RBP9□□□□□ -0.97
RBM39-209ENST00000416529 WIPF1O43516 503 aa9□□□□□ -0.97
RBM39-209ENST00000416529 RANBP6O60518 1105 aaKnown RBP9□□□□□ -0.97
RBM39-209ENST00000416529 LILRB3O75022 631 aa9□□□□□ -0.97
RBM39-209ENST00000416529 GH2P01242 217 aa9□□□□□ -0.97
RBM39-209ENST00000416529 INPP5BP32019 993 aa9□□□□□ -0.97
RBM39-209ENST00000416529 MCM2P49736 904 aa9□□□□□ -0.97
RBM39-209ENST00000416529 CLK2P49760 499 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms