RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 SCN9AQ15858 1988 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 TTLL1O95922 423 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 CDC25AP30304 524 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 TXLNAP40222 546 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 CRKP46108 304 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 SPATA1Q5VX52 437 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 E4F1Q66K89 784 aaPredicted RBP23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 EHD4Q9H223 541 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 TMX1Q9H3N1 280 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 DISC1Q9NRI5 854 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 CD2APQ9Y5K6 639 aa23.66■■□□□ 1.38
SLC13A3-204ENST00000413164 NFIAQ12857 509 aa23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 NONOQ15233 471 aaKnown RBP eCLIP23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 NAALADL2Q58DX5 795 aa23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 HSP90AA4PQ58FG1 418 aa23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 STRIP1Q5VSL9 837 aa23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 LRRC47Q8N1G4 583 aaKnown RBP23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 CCSER1Q9C0I3 900 aa23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 VAT1LQ9HCJ6 419 aa23.65■■□□□ 1.38
SLC13A3-204ENST00000413164 RIOK3O14730 519 aaKnown RBP23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 TBX2Q13207 712 aaPredicted RBP23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 KARSQ15046 597 aaKnown RBP23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 APTXQ7Z2E3 356 aaKnown RBP23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 CLEC10AQ8IUN9 316 aa23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 BLZF1Q9H2G9 400 aa23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 PIM2Q9P1W9 311 aa23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 FRMPD2Q68DX3 1309 aaPredicted RBP23.64■■□□□ 1.38
SLC13A3-204ENST00000413164 C21orf2O43822 256 aa23.64■■□□□ 1.37
SLC13A3-204ENST00000413164 CDK11BP21127 795 aaKnown RBP23.64■■□□□ 1.37
SLC13A3-204ENST00000413164 CDKAL1Q5VV42 579 aa23.64■■□□□ 1.37
SLC13A3-204ENST00000413164 SMYD4Q8IYR2 804 aaPredicted RBP23.64■■□□□ 1.37
SLC13A3-204ENST00000413164 SYNRGQ9UMZ2 1314 aa23.64■■□□□ 1.37
SLC13A3-204ENST00000413164 SIPA1L1O43166 1804 aa23.63■■□□□ 1.37
SLC13A3-204ENST00000413164 HLA-DOAP06340 250 aa23.63■■□□□ 1.37
SLC13A3-204ENST00000413164 DACT2Q5SW24 774 aa23.63■■□□□ 1.37
SLC13A3-204ENST00000413164 SOGA3Q5TF21 947 aa23.63■■□□□ 1.37
SLC13A3-204ENST00000413164 STAT6P42226 847 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 EIF6P56537 245 aaKnown RBP23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 HDLBPQ00341 1268 aaKnown RBP23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 ZNF543Q08ER8 600 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 NR1I3Q14994 352 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 NEK8Q86SG6 692 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 CCDC112Q8NEF3 446 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 PAXBP1Q9Y5B6 917 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 A0A1B0GTH6 734 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 PP2D1A8MPX8 630 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 ORC2Q13416 577 aaPredicted RBP23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 ZFPM1Q8IX07 1006 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 REXO1Q8N1G1 1221 aaKnown RBP23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 DNAJC18Q9H819 358 aa23.62■■□□□ 1.37
SLC13A3-204ENST00000413164 NRDCO43847 1150 aa23.61■■□□□ 1.37
SLC13A3-204ENST00000413164 PTPN14Q15678 1187 aa23.61■■□□□ 1.37
SLC13A3-204ENST00000413164 KLHL10Q6JEL2 608 aa23.61■■□□□ 1.37
SLC13A3-204ENST00000413164 C7orf43Q8WVR3 580 aa23.61■■□□□ 1.37
SLC13A3-204ENST00000413164 AK8Q96MA6 479 aa23.61■■□□□ 1.37
SLC13A3-204ENST00000413164 TRMT1Q9NXH9 659 aaKnown RBP23.61■■□□□ 1.37
SLC13A3-204ENST00000413164 ECE2O60344 883 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 OR52Z1P0C646 297 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 LETM2Q2VYF4 491 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 CEP135Q66GS9 1140 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 SPECC1LQ69YQ0 1117 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 KIAA0825Q8IV33 1275 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 CCDC17Q96LX7 622 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 IDI2Q9BXS1 227 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 MYH4Q9Y623 1939 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 CCNT1O60563 726 aaKnown RBP23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 RPN1P04843 607 aaKnown RBP23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 UBA7P41226 1012 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 PTPN21Q16825 1174 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 ZNF658Q5TYW1 1059 aaPredicted RBP23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 CC2D2BQ6DHV5 1058 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 TBCKQ8TEA7 893 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 RMND1Q9NWS8 449 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 PCDHAC2Q9Y5I4 1007 aa23.6■■□□□ 1.37
SLC13A3-204ENST00000413164 MYL1P05976 194 aa23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 STX17P56962 302 aa23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 RRAGBQ5VZM2 374 aa23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 TMEM139Q8IV31 216 aa23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 DHX36Q9H2U1 1008 aaKnown RBP23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 JMJD4Q9H9V9 463 aa23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 KBTBD4Q9NVX7 518 aa23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 CTIFO43310 598 aaKnown RBP23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 NPM3O75607 178 aaKnown RBP23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 DALRD3Q5D0E6 543 aaKnown RBP23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 GPCPD1Q9NPB8 672 aa23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 BIN2Q9UBW5 565 aaPredicted RBP23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 GOLGB1Q14789 3259 aaKnown RBP23.59■■□□□ 1.37
SLC13A3-204ENST00000413164 GPATCH4Q5T3I0 446 aaKnown RBP23.58■■□□□ 1.37
SLC13A3-204ENST00000413164 ADGRF4Q8IZF3 695 aa23.58■■□□□ 1.37
SLC13A3-204ENST00000413164 LRRC15Q8TF66 581 aa23.58■■□□□ 1.37
SLC13A3-204ENST00000413164 COA7Q96BR5 231 aa23.58■■□□□ 1.37
SLC13A3-204ENST00000413164 PPP1R13BQ96KQ4 1090 aa23.58■■□□□ 1.37
SLC13A3-204ENST00000413164 FAM198AQ9UFP1 575 aa23.58■■□□□ 1.37
SLC13A3-204ENST00000413164 RWDD2AQ9UIY3 292 aa23.58■■□□□ 1.37
SLC13A3-204ENST00000413164 PNMA6FA0A0J9YX94 578 aa23.57■■□□□ 1.36
SLC13A3-204ENST00000413164 SLURP2P0DP57 97 aa23.57■■□□□ 1.36
SLC13A3-204ENST00000413164 PPP4R3BQ5MIZ7 849 aa23.57■■□□□ 1.36
SLC13A3-204ENST00000413164 JAKMIP3Q5VZ66 844 aa23.57■■□□□ 1.36
SLC13A3-204ENST00000413164 PPP1R18Q6NYC8 613 aa23.57■■□□□ 1.36
SLC13A3-204ENST00000413164 MTMR8Q96EF0 704 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms