RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 TNS1Q9HBL0 1735 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 MYH4Q9Y623 1939 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 PDE6BP35913 854 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 LONP1P36776 959 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 LETM2Q2VYF4 491 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 JAKMIP3Q5VZ66 844 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 TMEM139Q8IV31 216 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 LZTS2Q9BRK4 669 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 DISC1Q9NRI5 854 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 BIN2Q9UBW5 565 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 SERPINB13Q9UIV8 391 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 GDAQ9Y2T3 454 aa17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 GREB1LQ9C091 1923 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-202ENST00000409472 ERCC5P28715 1186 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 TCP10Q12799 353 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 NAA30Q147X3 362 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 PTPN14Q15678 1187 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 TTBK2Q6IQ55 1244 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 OGFRQ9NZT2 677 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 CCNT1O60563 726 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 ALDH1B1P30837 517 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 STAT6P42226 847 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 TBX2Q13207 712 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 SEC63Q9UGP8 760 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-202ENST00000409472 PPP1R11O60927 126 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 CRKP46108 304 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 TEKT1Q969V4 418 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 RIOX1Q9H6W3 641 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 G3V3G9 751 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 GTPBP6O43824 516 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 SLC16A2P36021 539 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 ATP2B2Q01814 1243 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 DCAF8Q5TAQ9 597 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 CDKAL1Q5VV42 579 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 ANKRD7Q92527 254 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 TMX1Q9H3N1 280 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 SUGT1Q9Y2Z0 365 aa17.16■□□□□ 0.34
SCAMP4-202ENST00000409472 MPHOSPH10O00566 681 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 MYO1BO43795 1136 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 EDIL3O43854 480 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 SNHG28P0DPA3 235 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 SPATA1Q5VX52 437 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 GALNT17Q6IS24 598 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 TBCKQ8TEA7 893 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 KCND1Q9NSA2 647 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 A0A1B0GTH6 734 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 RPN1P04843 607 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 NR1I3Q14994 352 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 NONOQ15233 471 aaKnown RBP eCLIP17.15■□□□□ 0.342e-6■■■□□ 18.6
SCAMP4-202ENST00000409472 TC2NQ8N9U0 490 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 CCDC34Q96HJ3 373 aa17.15■□□□□ 0.34
SCAMP4-202ENST00000409472 DDTLA6NHG4 134 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 SPECC1LQ69YQ0 1117 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 KCTD1Q719H9 257 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 REXO1Q8N1G1 1221 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 C6orf50Q9HD87 102 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 FANCGO15287 622 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 CTIFO43310 598 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 ECE2O60344 883 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 OR52Z1P0C646 297 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 HHIPL2Q6UWX4 724 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 SH3BP5LQ7L8J4 393 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 KRT25Q7Z3Z0 450 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 JMJD4Q9H9V9 463 aa17.14■□□□□ 0.33
SCAMP4-202ENST00000409472 TTLL1O95922 423 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 PLCG1P19174 1290 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 TXLNAP40222 546 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 ZNF543Q08ER8 600 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 UBE2SQ16763 222 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 DACT2Q5SW24 774 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 NEK8Q86SG6 692 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 SLC37A4O43826 429 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 TDP2O95551 362 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 CCT6AP40227 531 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 PRCPP42785 496 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 PMS1P54277 932 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 AOC3Q16853 763 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 ADGRF4Q8IZF3 695 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 FAM198AQ9UFP1 575 aa17.13■□□□□ 0.33
SCAMP4-202ENST00000409472 KLRC4O43908 158 aa17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 UBA7P41226 1012 aa17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 TECP42680 631 aa17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 PLCD3Q8N3E9 789 aa17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 CCDC112Q8NEF3 446 aa17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 PDGFDQ9GZP0 370 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 ADD3Q9UEY8 706 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-202ENST00000409472 PSDA5PKW4 1024 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms