RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SLC39A2Q9NP94 309 aa14.77□□□□□ -0.04
NFKB1-202ENST00000394820 UBAP1LF5GYI3 381 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 PPP6R2O75170 966 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 MECOMQ03112 1051 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 RRAGAQ7L523 313 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 ENAHQ8N8S7 591 aaPredicted RBP14.77□□□□□ -0.05
NFKB1-202ENST00000394820 ENOX1Q8TC92 643 aaKnown RBP14.77□□□□□ -0.05
NFKB1-202ENST00000394820 FUT8Q9BYC5 575 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.05
NFKB1-202ENST00000394820 EHD2Q9NZN4 543 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 N4BP2Q86UW6 1770 aaPredicted RBP14.77□□□□□ -0.05
NFKB1-202ENST00000394820 TNS2Q63HR2 1409 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 EIF3CLB5ME19 914 aaKnown RBP14.77□□□□□ -0.05
NFKB1-202ENST00000394820 G3V3G9 751 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 TACC1O75410 805 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 BMP6P22004 513 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 LIFRP42702 1097 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 ZFYVE27Q5T4F4 411 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 NELFCDQ8IXH7 590 aa14.77□□□□□ -0.05
NFKB1-202ENST00000394820 EIF3CQ99613 913 aaKnown RBP14.77□□□□□ -0.05
NFKB1-202ENST00000394820 GOLGA6L7A0A1B0GV03 622 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 FRMD3A2A2Y4 597 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 TPTE2Q6XPS3 522 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 ZNF444Q8N0Y2 327 aaPredicted RBP14.76□□□□□ -0.05
NFKB1-202ENST00000394820 IFFO1Q0D2I5 559 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 TMTC2Q8N394 836 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
NFKB1-202ENST00000394820 CAPN7Q9Y6W3 813 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 DUSP10Q9Y6W6 482 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 MFAP3LO75121 409 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 LRRC41Q15345 812 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 IQCEQ6IPM2 695 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 MAPKAPK5Q8IW41 473 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 EHD4Q9H223 541 aa14.76□□□□□ -0.05
NFKB1-202ENST00000394820 ABCC12Q96J65 1359 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 ATP1A1P05023 1023 aaKnown RBP14.75□□□□□ -0.05
NFKB1-202ENST00000394820 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
NFKB1-202ENST00000394820 GGCXP38435 758 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 SPAG1Q07617 926 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 SLC44A5Q8NCS7 719 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 NAPAP54920 295 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 KRT83P78385 493 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 CFAP58Q5T655 872 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 SGMS1Q86VZ5 419 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 STAG1Q8WVM7 1258 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 MMS19Q96T76 1030 aa14.75□□□□□ -0.05
NFKB1-202ENST00000394820 NCK2O43639 380 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 ERLIN2O94905 339 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 PTPREP23469 700 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 INPP5BP32019 993 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 TFAP4Q01664 338 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 PDCLQ13371 301 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 EXOC4Q96A65 974 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 ALS2CR12Q96Q35 445 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 INTS13Q9NVM9 706 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 ZNF219Q9P2Y4 722 aaPredicted RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 TTC26A0AVF1 554 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 MAGEA1P43355 309 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 TOB1P50616 345 aaPredicted RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 CACNB1Q02641 598 aaPredicted RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 EARS2Q5JPH6 523 aaKnown RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 C8orf74Q6P047 294 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 SH2D3CQ8N5H7 860 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 GIMAP7Q8NHV1 300 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 TGFBRAP1Q8WUH2 860 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 SECISBP2LQ93073 1101 aaKnown RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 CEP89Q96ST8 783 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 IFIH1Q9BYX4 1025 aaKnown RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 LRWD1Q9UFC0 647 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 C6orf229H3BNL8 230 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 MPHOSPH10O00566 681 aaKnown RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 NDUFA10O95299 355 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 MOCS3O95396 460 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 PARP1P09874 1014 aaKnown RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 VEGFAP15692 232 aaPredicted RBP14.74□□□□□ -0.05
NFKB1-202ENST00000394820 KLK7P49862 253 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 RAPGEF1Q13905 1077 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 PTPAQ15257 358 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 NAA35Q5VZE5 725 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 JRKLQ9Y4A0 524 aa14.74□□□□□ -0.05
NFKB1-202ENST00000394820 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
NFKB1-202ENST00000394820 CKAP4Q07065 602 aaKnown RBP14.73□□□□□ -0.05
NFKB1-202ENST00000394820 ZNF512BQ96KM6 892 aaPredicted RBP14.73□□□□□ -0.05
NFKB1-202ENST00000394820 CCNT1O60563 726 aaKnown RBP14.73□□□□□ -0.05
NFKB1-202ENST00000394820 TECP42680 631 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 CRYBG1Q9Y4K1 1723 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 USP17L3A6NCW0 530 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 USP17L4A6NCW7 530 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 RPN1P04843 607 aaKnown RBP14.73□□□□□ -0.05
NFKB1-202ENST00000394820 USP8P40818 1118 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 TNNI2P48788 182 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 UBE4AQ14139 1066 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 ALX1Q15699 326 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 USP17L1Q7RTZ2 530 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 TMC4Q7Z404 712 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 CDCA7Q9BWT1 371 aaPredicted RBP14.73□□□□□ -0.05
NFKB1-202ENST00000394820 MLXIPQ9HAP2 919 aa14.73□□□□□ -0.05
NFKB1-202ENST00000394820 RASSF7Q02833 373 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms