RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 DIS3L2Q8IYB7 885 aaKnown RBP27.95■■■□□ 2.07
LRFN4-202ENST00000393952 CCDC148Q8NFR7 591 aa27.95■■■□□ 2.07
LRFN4-202ENST00000393952 SAFBQ15424 915 aaKnown RBP eCLIP27.94■■■□□ 2.06
LRFN4-202ENST00000393952 NPY5RQ15761 445 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 SPRYD7Q5W111 196 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 SAPCD2Q86UD0 394 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 FBXO11Q86XK2 927 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 TAL1P17542 331 aaPredicted RBP27.94■■■□□ 2.06
LRFN4-202ENST00000393952 FOXD4L6Q3SYB3 417 aaPredicted RBP27.94■■■□□ 2.06
LRFN4-202ENST00000393952 FOXD4L3Q6VB84 417 aaPredicted RBP27.94■■■□□ 2.06
LRFN4-202ENST00000393952 OXER1Q8TDS5 423 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 ATG4CQ96DT6 458 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 CHAMP1Q96JM3 812 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 AMNQ9BXJ7 453 aa27.94■■■□□ 2.06
LRFN4-202ENST00000393952 SMCHD1A6NHR9 2005 aa27.93■■■□□ 2.06
LRFN4-202ENST00000393952 BTBD18B2RXH4 712 aa27.93■■■□□ 2.06
LRFN4-202ENST00000393952 COG2Q14746 738 aa27.93■■■□□ 2.06
LRFN4-202ENST00000393952 FASTKD5Q7L8L6 764 aaKnown RBP27.93■■■□□ 2.06
LRFN4-202ENST00000393952 FAM177A1Q8N128 213 aaPredicted RBP27.93■■■□□ 2.06
LRFN4-202ENST00000393952 CCDC12Q8WUD4 166 aaPredicted RBP27.93■■■□□ 2.06
LRFN4-202ENST00000393952 PCDHA1Q9Y5I3 950 aa27.93■■■□□ 2.06
LRFN4-202ENST00000393952 ADAMTS3O15072 1205 aa27.92■■■□□ 2.06
LRFN4-202ENST00000393952 CALML3P27482 149 aa27.92■■■□□ 2.06
LRFN4-202ENST00000393952 DSG3P32926 999 aa27.92■■■□□ 2.06
LRFN4-202ENST00000393952 USH1GQ495M9 461 aa27.92■■■□□ 2.06
LRFN4-202ENST00000393952 FAM173BQ6P4H8 233 aa27.92■■■□□ 2.06
LRFN4-202ENST00000393952 ZSCAN16Q9H4T2 348 aaPredicted RBP27.92■■■□□ 2.06
LRFN4-202ENST00000393952 SLC38A10Q9HBR0 1119 aa27.92■■■□□ 2.06
LRFN4-202ENST00000393952 AGTPBP1Q9UPW5 1226 aa27.92■■■□□ 2.06
LRFN4-202ENST00000393952 MYH15Q9Y2K3 1946 aa27.91■■■□□ 2.06
LRFN4-202ENST00000393952 ZBTB48P10074 688 aaPredicted RBP27.91■■■□□ 2.06
LRFN4-202ENST00000393952 KRT2P35908 639 aa27.91■■■□□ 2.06
LRFN4-202ENST00000393952 ZNF157P51786 506 aaPredicted RBP27.91■■■□□ 2.06
LRFN4-202ENST00000393952 FSTL1Q12841 308 aa27.91■■■□□ 2.06
LRFN4-202ENST00000393952 PPP1R18Q6NYC8 613 aa27.91■■■□□ 2.06
LRFN4-202ENST00000393952 MS4A4AQ96JQ5 239 aa27.91■■■□□ 2.06
LRFN4-202ENST00000393952 TLL2Q9Y6L7 1015 aa27.91■■■□□ 2.06
LRFN4-202ENST00000393952 COL11A1P12107 1806 aaPredicted RBP27.91■■■□□ 2.06
LRFN4-202ENST00000393952 SMCO2A6NFE2 343 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 HOXA7P31268 230 aaPredicted RBP27.9■■■□□ 2.06
LRFN4-202ENST00000393952 GTF2A2P52657 109 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 NR5A1Q13285 461 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 GNL2Q13823 731 aaKnown RBP27.9■■■□□ 2.06
LRFN4-202ENST00000393952 GPAT2Q6NUI2 795 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 RASAL3Q86YV0 1011 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 ZMYND12Q9H0C1 365 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 PCDHA4Q9UN74 947 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 ESYT2A0FGR8 921 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 VWA5AO00534 786 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 CETPP11597 493 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 U2AF2P26368 475 aaKnown RBP eCLIP27.9■■■□□ 2.06
LRFN4-202ENST00000393952 RGMBQ6NW40 437 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 FOXP1Q9H334 677 aaPredicted RBP27.9■■■□□ 2.06
LRFN4-202ENST00000393952 BRMS1Q9HCU9 246 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 ZNF536O15090 1300 aa27.9■■■□□ 2.06
LRFN4-202ENST00000393952 TMEM88BA6NKF7 163 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 SPDYE16A6NNV3 312 aaPredicted RBP27.89■■■□□ 2.05
LRFN4-202ENST00000393952 ZBED4O75132 1171 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 BLIDQ8IZY5 108 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 DAGLBQ8NCG7 672 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 C6orf50Q9HD87 102 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 HOXC10Q9NYD6 342 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 ABT1Q9ULW3 272 aaKnown RBP27.89■■■□□ 2.05
LRFN4-202ENST00000393952 ADAMTS5Q9UNA0 930 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 ATP6V1DQ9Y5K8 247 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 MYPNQ86TC9 1320 aa27.89■■■□□ 2.05
LRFN4-202ENST00000393952 CCL15-CCL14A0A0B4J2E2 113 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 FDX1P10109 184 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 ADCY7P51828 1080 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 CCL15Q16663 113 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 GALNT17Q6IS24 598 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 BRAPQ7Z569 592 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 BRI3BPQ8WY22 251 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 AGBL1Q96MI9 1066 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 CTDP1Q9Y5B0 961 aaPredicted RBP27.88■■■□□ 2.05
LRFN4-202ENST00000393952 TCHHQ07283 1943 aa27.88■■■□□ 2.05
LRFN4-202ENST00000393952 BAG4O95429 457 aaKnown RBP27.87■■■□□ 2.05
LRFN4-202ENST00000393952 ICAM1P05362 532 aa27.87■■■□□ 2.05
LRFN4-202ENST00000393952 IRX3P78415 501 aaPredicted RBP27.87■■■□□ 2.05
LRFN4-202ENST00000393952 NOSTRINQ8IVI9 506 aa27.87■■■□□ 2.05
LRFN4-202ENST00000393952 CPXCR1Q8N123 301 aa27.87■■■□□ 2.05
LRFN4-202ENST00000393952 TNFRSF25Q93038 417 aa27.87■■■□□ 2.05
LRFN4-202ENST00000393952 RAVER2Q9HCJ3 691 aaKnown RBP27.87■■■□□ 2.05
LRFN4-202ENST00000393952 GNA11P29992 359 aa27.86■■■□□ 2.05
LRFN4-202ENST00000393952 TRAF1Q13077 416 aa27.86■■■□□ 2.05
LRFN4-202ENST00000393952 REPS2Q8NFH8 660 aa27.86■■■□□ 2.05
LRFN4-202ENST00000393952 RASGRP4Q8TDF6 673 aa27.86■■■□□ 2.05
LRFN4-202ENST00000393952 P2RX7Q99572 595 aaKnown RBP27.86■■■□□ 2.05
LRFN4-202ENST00000393952 ASCC2Q9H1I8 757 aaPredicted RBP27.86■■■□□ 2.05
LRFN4-202ENST00000393952 CCPG1Q9ULG6 757 aa27.86■■■□□ 2.05
LRFN4-202ENST00000393952 DNM1Q05193 864 aaKnown RBP27.86■■■□□ 2.05
LRFN4-202ENST00000393952 PABPC4Q13310 644 aaKnown RBP eCLIP27.86■■■□□ 2.051e-6■■□□□ 14.5
LRFN4-202ENST00000393952 NOM1Q5C9Z4 860 aaKnown RBP27.86■■■□□ 2.05
LRFN4-202ENST00000393952 CLEC17AQ6ZS10 378 aa27.86■■■□□ 2.05
LRFN4-202ENST00000393952 RIC8AQ9NPQ8 531 aa27.86■■■□□ 2.05
LRFN4-202ENST00000393952 M0R2N6 131 aa27.85■■■□□ 2.05
LRFN4-202ENST00000393952 PSTPIP2Q9H939 334 aa27.85■■■□□ 2.05
LRFN4-202ENST00000393952 PCDHA6Q9UN73 950 aa27.85■■■□□ 2.05
LRFN4-202ENST00000393952 PCDHA8Q9Y5H6 950 aa27.85■■■□□ 2.05
LRFN4-202ENST00000393952 A0A0G2JMZ2 1700 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms