RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 VCAM1P19320 739 aa28.14■■■□□ 2.09
ECHDC3-201ENST00000379215 STK38Q15208 465 aa28.14■■■□□ 2.09
ECHDC3-201ENST00000379215 FBXO11Q86XK2 927 aa28.14■■■□□ 2.09
ECHDC3-201ENST00000379215 EMILIN3Q9NT22 766 aa28.14■■■□□ 2.09
ECHDC3-201ENST00000379215 PNMA2Q9UL42 364 aa28.14■■■□□ 2.09
ECHDC3-201ENST00000379215 CEP131Q9UPN4 1083 aa28.14■■■□□ 2.09
ECHDC3-201ENST00000379215 CCDC194A0A1B0GVG4 234 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 GOLGA6L4A6NEF3 574 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 TRIM75PA6NK02 468 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 FDX1P10109 184 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 PPATQ06203 517 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 DLK2Q6UY11 383 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 KRT25Q7Z3Z0 450 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 JMYQ8N9B5 988 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 PRPF38AQ8NAV1 312 aaKnown RBP28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 SLF1Q9BQI6 1058 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 RANBP17Q9H2T7 1088 aaKnown RBP28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 PCDHA1Q9Y5I3 950 aa28.13■■■□□ 2.09
ECHDC3-201ENST00000379215 M0R2N6 131 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 PPP1R11O60927 126 aaPredicted RBP28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 BMP15O95972 392 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 MRPL12P52815 198 aaKnown RBP28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 CEBPZQ03701 1054 aaKnown RBP28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 ERO1BQ86YB8 467 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 REXO1Q8N1G1 1221 aaKnown RBP28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 LINC00301Q8NCQ3 95 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 CUL5Q93034 780 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 KIFC2Q96AC6 838 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 COA7Q96BR5 231 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 RIC8AQ9NPQ8 531 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 TCHHQ07283 1943 aa28.12■■■□□ 2.09
ECHDC3-201ENST00000379215 FKBP1BP68106 108 aa28.11■■■□□ 2.09
ECHDC3-201ENST00000379215 SF3A1Q15459 793 aaKnown RBP28.11■■■□□ 2.09
ECHDC3-201ENST00000379215 SH3D19Q5HYK7 790 aa28.11■■■□□ 2.09
ECHDC3-201ENST00000379215 MAP1SQ66K74 1059 aaPredicted RBP28.11■■■□□ 2.09
ECHDC3-201ENST00000379215 TANGO6Q9C0B7 1094 aa28.11■■■□□ 2.09
ECHDC3-201ENST00000379215 MCTP2Q6DN12 878 aa28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 PCDHA6Q9UN73 950 aa28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 PCDHA8Q9Y5H6 950 aa28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 CLIC4Q9Y696 253 aa28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 SLC39A14Q15043 492 aa28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 PIK3AP1Q6ZUJ8 805 aa28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 RPAP3Q9H6T3 665 aaPredicted RBP28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 MORC2Q9Y6X9 1032 aaPredicted RBP28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 OTOFQ9HC10 1997 aa28.1■■■□□ 2.09
ECHDC3-201ENST00000379215 PHIPQ8WWQ0 1821 aa28.09■■■□□ 2.09
ECHDC3-201ENST00000379215 SPDYE5A6NIY4 337 aa28.09■■■□□ 2.09
ECHDC3-201ENST00000379215 SPTLC2O15270 562 aa28.09■■■□□ 2.09
ECHDC3-201ENST00000379215 POTEIP0CG38 1075 aa28.09■■■□□ 2.09
ECHDC3-201ENST00000379215 POTEJP0CG39 1038 aa28.09■■■□□ 2.09
ECHDC3-201ENST00000379215 HMGCS2P54868 508 aa28.09■■■□□ 2.09
ECHDC3-201ENST00000379215 FTOQ9C0B1 505 aaKnown RBP eCLIP28.09■■■□□ 2.09
ECHDC3-201ENST00000379215 PPP6R2O75170 966 aa28.08■■■□□ 2.09
ECHDC3-201ENST00000379215 PSTPIP2Q9H939 334 aa28.08■■■□□ 2.09
ECHDC3-201ENST00000379215 PPP1R9AQ9ULJ8 1098 aa28.08■■■□□ 2.09
ECHDC3-201ENST00000379215 CXCL11O14625 94 aa28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 FLOT1O75955 427 aa28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 ME1P48163 572 aa28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 TOB1P50616 345 aaPredicted RBP28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 ELP3Q9H9T3 547 aa28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 GADD45BO75293 160 aaPredicted RBP28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 NONOQ15233 471 aaKnown RBP eCLIP28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 LDLRAD1Q5T700 205 aa28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.07■■■□□ 2.08
ECHDC3-201ENST00000379215 PPIL2Q13356 520 aa28.06■■■□□ 2.08
ECHDC3-201ENST00000379215 TTC38Q5R3I4 469 aa28.06■■■□□ 2.08
ECHDC3-201ENST00000379215 GPT2Q8TD30 523 aa28.06■■■□□ 2.08
ECHDC3-201ENST00000379215 SYAP1Q96A49 352 aaPredicted RBP28.06■■■□□ 2.08
ECHDC3-201ENST00000379215 NMRK2Q9NPI5 230 aa28.06■■■□□ 2.08
ECHDC3-201ENST00000379215 FBXO28Q9NVF7 368 aa28.06■■■□□ 2.08
ECHDC3-201ENST00000379215 MYPNQ86TC9 1320 aa28.06■■■□□ 2.08
ECHDC3-201ENST00000379215 PTPAQ15257 358 aa28.05■■■□□ 2.08
ECHDC3-201ENST00000379215 EARS2Q5JPH6 523 aaKnown RBP28.05■■■□□ 2.08
ECHDC3-201ENST00000379215 CTDP1Q9Y5B0 961 aaPredicted RBP28.05■■■□□ 2.08
ECHDC3-201ENST00000379215 ABCB11O95342 1321 aa28.05■■■□□ 2.08
ECHDC3-201ENST00000379215 MRPL11Q9Y3B7 192 aaKnown RBP28.04■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L15C9J2P7 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L13C9JLJ4 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L11C9JVI0 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L18D6R9N7 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L22D6RA61 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L17D6RBQ6 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L19D6RCP7 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L20D6RJB6 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 ZBED4O75132 1171 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 ICAM1P05362 532 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USP17L24Q0WX57 530 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 AP3B2Q13367 1082 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 ORC2Q13416 577 aaPredicted RBP28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 USH1GQ495M9 461 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 ADALQ6DHV7 355 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 PROCA1Q8NCQ7 364 aaPredicted RBP28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 RASGRP4Q8TDF6 673 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 SLC38A10Q9HBR0 1119 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 KCNH4Q9UQ05 1017 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 A0A1W2PQ27 194 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 A0A1W2PQ64 194 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 A0A1W2PQD8 194 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 FAM205CA6NFA0 338 aa28.03■■■□□ 2.08
ECHDC3-201ENST00000379215 TRAF5O00463 557 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms