RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MCM7P33993 719 aa13.74□□□□□ -0.21
HMGCL-202ENST00000374487 SARSP49591 514 aaKnown RBP13.74□□□□□ -0.21
HMGCL-202ENST00000374487 APLP1P51693 650 aa13.74□□□□□ -0.21
HMGCL-202ENST00000374487 RBM10P98175 930 aaKnown RBP13.74□□□□□ -0.21
HMGCL-202ENST00000374487 ATP2C1P98194 919 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-202ENST00000374487 HSP90AA2PQ14568 343 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-202ENST00000374487 KRT26Q7Z3Y9 468 aa13.74□□□□□ -0.21
HMGCL-202ENST00000374487 BLIDQ8IZY5 108 aa13.74□□□□□ -0.21
HMGCL-202ENST00000374487 CCDC150Q8NCX0 1101 aa13.74□□□□□ -0.21
HMGCL-202ENST00000374487 GPKOWQ92917 476 aaPredicted RBP eCLIP13.74□□□□□ -0.21
HMGCL-202ENST00000374487 ZBED3Q96IU2 234 aaPredicted RBP13.74□□□□□ -0.21
HMGCL-202ENST00000374487 HSD3B7Q9H2F3 369 aa13.74□□□□□ -0.21
HMGCL-202ENST00000374487 SLFN14P0C7P3 912 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 TNNT1P13805 278 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 RASA1P20936 1047 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 AFMP43652 599 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 CDK8P49336 464 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 CACNB3P54284 484 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 CCZ1BP86790 482 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 CCZ1P86791 482 aaPredicted RBP13.73□□□□□ -0.21
HMGCL-202ENST00000374487 TMEM47Q9BQJ4 181 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 MAD2L2Q9UI95 211 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 FZD1Q9UP38 647 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 POLR2AP24928 1970 aaKnown RBP13.73□□□□□ -0.21
HMGCL-202ENST00000374487 CDK11BP21127 795 aaKnown RBP13.73□□□□□ -0.21
HMGCL-202ENST00000374487 MORC3Q14149 939 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 DLGAP5Q15398 846 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 DCPSQ96C86 337 aaKnown RBP13.73□□□□□ -0.21
HMGCL-202ENST00000374487 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
HMGCL-202ENST00000374487 TDRD3Q9H7E2 651 aaKnown RBP13.73□□□□□ -0.21
HMGCL-202ENST00000374487 PCDHA4Q9UN74 947 aa13.73□□□□□ -0.21
HMGCL-202ENST00000374487 FLT1P17948 1338 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 RRP9O43818 475 aaKnown RBP13.72□□□□□ -0.21
HMGCL-202ENST00000374487 CRKP46108 304 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 C16orf86Q6ZW13 317 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
HMGCL-202ENST00000374487 LZTS2Q9BRK4 669 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 HDAC9Q9UKV0 1011 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 A0A087X0B3 334 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 CCDC194A0A1B0GVG4 234 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 SPDYE2BA6NHP3 402 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 SPDYE6P0CI01 402 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
HMGCL-202ENST00000374487 CDAN1Q8IWY9 1227 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 CCDC148Q8NFR7 591 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 PAGE5Q96GU1 130 aa13.72□□□□□ -0.21
HMGCL-202ENST00000374487 KLRF2D3W0D1 207 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 CELF2O95319 508 aaKnown RBP13.71□□□□□ -0.21
HMGCL-202ENST00000374487 GOLGA8HP0CJ92 632 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 GTF2F1P35269 517 aaKnown RBP eCLIP13.71□□□□□ -0.21
HMGCL-202ENST00000374487 RHBDL3P58872 404 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 HSP90AA4PQ58FG1 418 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 ARMCX5Q6P1M9 558 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 MOB2Q70IA6 237 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 IQUBQ8NA54 791 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 SPATA20Q8TB22 786 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 ENOX1Q8TC92 643 aaKnown RBP13.71□□□□□ -0.21
HMGCL-202ENST00000374487 PYM1Q9BRP8 204 aaKnown RBP13.71□□□□□ -0.21
HMGCL-202ENST00000374487 NFE2L3Q9Y4A8 694 aa13.71□□□□□ -0.21
HMGCL-202ENST00000374487 PALM3A6NDB9 673 aaPredicted RBP13.71□□□□□ -0.22
HMGCL-202ENST00000374487 RIOK3O14730 519 aaKnown RBP13.71□□□□□ -0.22
HMGCL-202ENST00000374487 PTPN14Q15678 1187 aa13.71□□□□□ -0.22
HMGCL-202ENST00000374487 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.22
HMGCL-202ENST00000374487 VEZTQ9HBM0 779 aa13.71□□□□□ -0.22
HMGCL-202ENST00000374487 TRMT1Q9NXH9 659 aaKnown RBP13.71□□□□□ -0.22
HMGCL-202ENST00000374487 PAXBP1Q9Y5B6 917 aa13.71□□□□□ -0.22
HMGCL-202ENST00000374487 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
HMGCL-202ENST00000374487 ADAMTS3O15072 1205 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 PARP1P09874 1014 aaKnown RBP13.7□□□□□ -0.22
HMGCL-202ENST00000374487 TOP1P11387 765 aaKnown RBP13.7□□□□□ -0.22
HMGCL-202ENST00000374487 ERCC5P28715 1186 aaPredicted RBP13.7□□□□□ -0.22
HMGCL-202ENST00000374487 CEP135Q66GS9 1140 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 ARL6IP4Q66PJ3 421 aaKnown RBP13.7□□□□□ -0.22
HMGCL-202ENST00000374487 WWC2Q6AWC2 1192 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 GALNT17Q6IS24 598 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
HMGCL-202ENST00000374487 DNAJC5GQ8N7S2 189 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 RASGRP4Q8TDF6 673 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 ZNF592Q92610 1267 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 GSDMAQ96QA5 445 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 BARHL2Q9NY43 387 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 GAKO14976 1311 aa13.7□□□□□ -0.22
HMGCL-202ENST00000374487 USP27XA6NNY8 438 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 CYTH3O43739 400 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 TXLNAP40222 546 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 PICALMQ13492 652 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 PRKG1Q13976 671 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
HMGCL-202ENST00000374487 SH3RF1Q7Z6J0 888 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 SULF1Q8IWU6 871 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 CCAR2Q8N163 923 aaKnown RBP13.69□□□□□ -0.22
HMGCL-202ENST00000374487 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 TMEM88BA6NKF7 163 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 TCP10L2B9ZVM9 353 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
HMGCL-202ENST00000374487 CT47A1Q5JQC4 288 aaPredicted RBP13.69□□□□□ -0.22
HMGCL-202ENST00000374487 TYW1BQ6NUM6 668 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 VSTM4Q8IW00 320 aa13.69□□□□□ -0.22
HMGCL-202ENST00000374487 CEP95Q96GE4 821 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms