RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 RESP18Q5W5W9 173 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 C17orf99Q6UX52 265 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 PRIMPOLQ96LW4 560 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 UBAC1Q9BSL1 405 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 RNF26Q9BY78 433 aaPredicted RBP12.67□□□□□ -0.38
SNU13-202ENST00000355257 ABCF2Q9UG63 623 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNU13-202ENST00000355257 PTCH2Q9Y6C5 1203 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 CENPFP49454 3210 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
SNU13-202ENST00000355257 BECN2A8MW95 431 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 NEMFO60524 1076 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
SNU13-202ENST00000355257 SAFBQ15424 915 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNU13-202ENST00000355257 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 PRPF38BQ5VTL8 546 aaKnown RBP12.67□□□□□ -0.38
SNU13-202ENST00000355257 GPAT2Q6NUI2 795 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 SHC4Q6S5L8 630 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 CCDC186Q7Z3E2 898 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 DZIP1Q86YF9 867 aaKnown RBP12.67□□□□□ -0.38
SNU13-202ENST00000355257 CCDC144CPQ8IYA2 1237 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 SPC24Q8NBT2 197 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 SDR42E1Q8WUS8 393 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 ZNF333Q96JL9 665 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 MAP7D2Q96T17 732 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 ATP8A2Q9NTI2 1148 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 PYCARDQ9ULZ3 195 aa12.67□□□□□ -0.38
SNU13-202ENST00000355257 TNKSO95271 1327 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 NPM3O75607 178 aaKnown RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 CALM1P0DP23 149 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 CALM2P0DP24 149 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 CALM3P0DP25 149 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 PTGS1P23219 599 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 SYKP43405 635 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 FUT2Q10981 343 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 GNL2Q13823 731 aaKnown RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 RILPL1Q5EBL4 403 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 SPTY2D1Q68D10 685 aaPredicted RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 CTR9Q6PD62 1173 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 SCYL3Q8IZE3 742 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 ZSCAN10Q96SZ4 725 aaPredicted RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 NOL10Q9BSC4 688 aaKnown RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 PDCL3Q9H2J4 239 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 RBM28Q9NW13 759 aaKnown RBP12.66□□□□□ -0.38
SNU13-202ENST00000355257 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
SNU13-202ENST00000355257 PDHXO00330 501 aa12.65□□□□□ -0.38
SNU13-202ENST00000355257 CXCL11O14625 94 aa12.65□□□□□ -0.38
SNU13-202ENST00000355257 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.38
SNU13-202ENST00000355257 DDAH1O94760 285 aa12.65□□□□□ -0.38
SNU13-202ENST00000355257 PTPREP23469 700 aa12.65□□□□□ -0.38
SNU13-202ENST00000355257 TOB1P50616 345 aaPredicted RBP12.65□□□□□ -0.38
SNU13-202ENST00000355257 DYNLL1P63167 89 aaKnown RBP12.65□□□□□ -0.38
SNU13-202ENST00000355257 SLF2Q8IX21 1173 aa12.65□□□□□ -0.38
SNU13-202ENST00000355257 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
SNU13-202ENST00000355257 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
SNU13-202ENST00000355257 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
SNU13-202ENST00000355257 BRCA2P51587 3418 aa12.65□□□□□ -0.39
SNU13-202ENST00000355257 A0A0G2JLL6 359 aaPredicted RBP12.64□□□□□ -0.39
SNU13-202ENST00000355257 SMTNL1A8MU46 457 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 MINDY4BA8MYZ0 360 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 BTBD18B2RXH4 712 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 DYNC1I1O14576 645 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 IKBKBO14920 756 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 BCRP11274 1271 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 PTPRAP18433 802 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 MARCKSP29966 332 aaPredicted RBP12.64□□□□□ -0.39
SNU13-202ENST00000355257 GTF2F1P35269 517 aaKnown RBP eCLIP12.64□□□□□ -0.39
SNU13-202ENST00000355257 PRRT2Q7Z6L0 340 aaPredicted RBP12.64□□□□□ -0.39
SNU13-202ENST00000355257 KRI1Q8N9T8 703 aaKnown RBP12.64□□□□□ -0.39
SNU13-202ENST00000355257 ZKSCAN3Q9BRR0 538 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 CRNKL1Q9BZJ0 848 aaKnown RBP12.64□□□□□ -0.39
SNU13-202ENST00000355257 CPA4Q9UI42 421 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 AFG3L2Q9Y4W6 797 aa12.64□□□□□ -0.39
SNU13-202ENST00000355257 TBC1D12O60347 775 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 EN2P19622 333 aaPredicted RBP12.63□□□□□ -0.39
SNU13-202ENST00000355257 TROAPQ12815 778 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 PICALMQ13492 652 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 NCAPHQ15003 741 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 PKN1Q16512 942 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 DPCR1Q3MIW9 517 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 STK11IPQ8N1F8 1099 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 AOPEPQ8N6M6 819 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 MYRIPQ8NFW9 859 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 DCP1AQ9NPI6 582 aaPredicted RBP12.63□□□□□ -0.39
SNU13-202ENST00000355257 KCND1Q9NSA2 647 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.63□□□□□ -0.39
SNU13-202ENST00000355257 IMPACTQ9P2X3 320 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 ARPP21Q9UBL0 812 aaPredicted RBP12.63□□□□□ -0.39
SNU13-202ENST00000355257 NRBP1Q9UHY1 535 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 CEP131Q9UPN4 1083 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 MYH1P12882 1939 aa12.63□□□□□ -0.39
SNU13-202ENST00000355257 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
SNU13-202ENST00000355257 USP17L21D6R901 530 aa12.62□□□□□ -0.39
SNU13-202ENST00000355257 CTNND1O60716 968 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms