RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PSMC4P43686 418 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 ANKRD13CQ8N6S4 541 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 ZSWIM5Q9P217 1185 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 ADAM9Q13443 819 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 CACTINQ8WUQ7 758 aaKnown RBP17.65■□□□□ 0.42
PTPN11-201ENST00000351677 ALDH3A1P30838 453 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 INPP5BP32019 993 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 SLC8A3P57103 927 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 KRT71Q3SY84 523 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 SLFN13Q68D06 897 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 CDAN1Q8IWY9 1227 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 RNF34Q969K3 372 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 CNOT6LQ96LI5 555 aaKnown RBP17.65■□□□□ 0.42
PTPN11-201ENST00000351677 RESTQ13127 1097 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 FAM26FQ5R3K3 315 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 RPGRIP1Q96KN7 1286 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
PTPN11-201ENST00000351677 PCDHA4Q9UN74 947 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 HEG1Q9ULI3 1381 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 CYP2D7A0A087X1C5 515 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 POLR2MP0CAP2 368 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 CEP128Q6ZU80 1094 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 PCDHA1Q9Y5I3 950 aa17.65■□□□□ 0.42
PTPN11-201ENST00000351677 LACTBP83111 547 aaPredicted RBP17.64■□□□□ 0.42
PTPN11-201ENST00000351677 PGBD1Q96JS3 809 aa17.64■□□□□ 0.42
PTPN11-201ENST00000351677 TRIM6Q9C030 488 aaPredicted RBP17.64■□□□□ 0.42
PTPN11-201ENST00000351677 TMEM232C9JQI7 657 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 K7ENM7 598 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 MMP1P03956 469 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 GBP6Q6ZN66 633 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 GSDMAQ96QA5 445 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 HAUS4Q9H6D7 363 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 PIH1D3Q9NQM4 214 aaKnown RBP17.64■□□□□ 0.41
PTPN11-201ENST00000351677 WDR17Q8IZU2 1322 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 ARHGEF16Q5VV41 709 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 MAN1B1Q9UKM7 699 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 KIAA1024Q9UPX6 916 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 PSDA5PKW4 1024 aaPredicted RBP17.64■□□□□ 0.41
PTPN11-201ENST00000351677 DAPK3O43293 454 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 CLUL1Q15846 466 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 ADAT2Q7Z6V5 191 aaKnown RBP17.64■□□□□ 0.41
PTPN11-201ENST00000351677 TUBGCP2Q9BSJ2 902 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 KRIT1O00522 736 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 CDC25AP30304 524 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 RBL2Q08999 1139 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 FAM178BQ8IXR5 827 aa17.64■□□□□ 0.41
PTPN11-201ENST00000351677 CCDC160A6NGH7 325 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 MAP7D1Q3KQU3 841 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 TAOK1Q7L7X3 1001 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 OTUD6AQ7L8S5 288 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.63■□□□□ 0.41
PTPN11-201ENST00000351677 HECW2Q9P2P5 1572 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.63■□□□□ 0.41
PTPN11-201ENST00000351677 PPANQ9NQ55 473 aaKnown RBP17.63■□□□□ 0.41
PTPN11-201ENST00000351677 DENND2CQ68D51 928 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 PLA2G4DQ86XP0 818 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 MTMR3Q13615 1198 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 XDHP47989 1333 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 XKR9Q5GH70 373 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 GJA10Q969M2 543 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 STIM2Q9P246 746 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 IVNS1ABPQ9Y6Y0 642 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
PTPN11-201ENST00000351677 ATP10DQ9P241 1426 aa17.63■□□□□ 0.41
PTPN11-201ENST00000351677 TRPM1Q7Z4N2 1603 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 ENC1O14682 589 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 NPHP4O75161 1426 aaPredicted RBP17.62■□□□□ 0.41
PTPN11-201ENST00000351677 TSPOAP1O95153 1857 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 FYB2Q5VWT5 728 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 DEPTORQ8TB45 409 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 RAB3IL1Q8TBN0 382 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 MGARPQ8TDB4 240 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 CABS1Q96KC9 395 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 RAB17Q9H0T7 212 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 MRPL11Q9Y3B7 192 aaKnown RBP17.62■□□□□ 0.41
PTPN11-201ENST00000351677 SPICE1Q8N0Z3 855 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 CTNNA1P35221 906 aaKnown RBP17.62■□□□□ 0.41
PTPN11-201ENST00000351677 PPP2R5DQ14738 602 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 SLC35F6Q8N357 371 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 GLG1Q92896 1179 aa17.62■□□□□ 0.41
PTPN11-201ENST00000351677 TBC1D8O95759 1140 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 IKBKBO14920 756 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 FAM182BQ5T319 152 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 PCDHB6Q9Y5E3 794 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 TET3O43151 1660 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 SEMA3EO15041 775 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 KRT15P19012 456 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 RASSF7Q02833 373 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 LRRC41Q15345 812 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 TAF12Q16514 161 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 DPH5Q9H2P9 285 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 COL4A3BPQ9Y5P4 624 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 PRPF6O94906 941 aaKnown RBP17.61■□□□□ 0.41
PTPN11-201ENST00000351677 CEP85LQ5SZL2 805 aa17.61■□□□□ 0.41
PTPN11-201ENST00000351677 PIGBQ92521 554 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms