RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PTCH2Q9Y6C5 1203 aa14.98□□□□□ -0.01
SRSF3-201ENST00000339436 KLRF2D3W0D1 207 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 ICAM1P05362 532 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 CALM1P0DP23 149 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 CALM2P0DP24 149 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 CALM3P0DP25 149 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 FLT3LGP49771 235 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 SNAP25P60880 206 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 FGD1P98174 961 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 GRB14Q14449 540 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 MORN1Q5T089 497 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 CCDC174Q6PII3 467 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 Q6ZUG5 572 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 MICU3Q86XE3 530 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 CTCFLQ8NI51 663 aaPredicted RBP14.97□□□□□ -0.01
SRSF3-201ENST00000339436 GJD2Q9UKL4 321 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 RIPK3Q9Y572 518 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 IVNS1ABPQ9Y6Y0 642 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 RXRAP19793 462 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 PTPREP23469 700 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 KIF5BP33176 963 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 IRF5Q13568 498 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 CDC37Q16543 378 aaPredicted RBP14.97□□□□□ -0.01
SRSF3-201ENST00000339436 ADGRF4Q8IZF3 695 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 TNS4Q8IZW8 715 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 RAET1EQ8TD07 263 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 BRF1Q92994 677 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 AGBL1Q96MI9 1066 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 NUDT12Q9BQG2 462 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 BRPF3Q9ULD4 1205 aa14.97□□□□□ -0.01
SRSF3-201ENST00000339436 MKI67P46013 3256 aaKnown RBP14.96□□□□□ -0.01
SRSF3-201ENST00000339436 KLF18A0A0U1RQI7 1052 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 SLC15A5A6NIM6 579 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 DHX16O60231 1041 aaKnown RBP14.96□□□□□ -0.02
SRSF3-201ENST00000339436 RCAN1P53805 252 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 SLC35G1Q2M3R5 365 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.02
SRSF3-201ENST00000339436 RAB11FIP4Q86YS3 637 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 ABRAQ8N0Z2 381 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 USP6NLQ92738 828 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 APBA2Q99767 749 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 CCPG1Q9ULG6 757 aa14.96□□□□□ -0.02
SRSF3-201ENST00000339436 NID2Q14112 1375 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 FRMPD3Q5JV73 1810 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 ZBTB43O43298 467 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 STRNO43815 780 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 TAL1P17542 331 aaPredicted RBP14.95□□□□□ -0.02
SRSF3-201ENST00000339436 TKFCQ3LXA3 575 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 SYNE3Q6ZMZ3 975 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 NBPF11Q86T75 865 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 CCDC144CPQ8IYA2 1237 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 CHST13Q8NET6 341 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 MTMR8Q96EF0 704 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 JMJD4Q9H9V9 463 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 HOMER2Q9NSB8 354 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 RNF146Q9NTX7 359 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 PNMA2Q9UL42 364 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 HPS5Q9UPZ3 1129 aa14.95□□□□□ -0.02
SRSF3-201ENST00000339436 LRRC37A2A6NM11 1700 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 GOLGA8BA8MQT2 603 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 CYTH3O43739 400 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 FCER1AP12319 257 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 XRCC5P13010 732 aaKnown RBP14.94□□□□□ -0.02
SRSF3-201ENST00000339436 ADORA2AP29274 412 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 RGS2P41220 211 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 SLC4A3P48751 1232 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 APOBRQ0VD83 1088 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 MAP2K5Q13163 448 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 TOB2Q14106 344 aaPredicted RBP14.94□□□□□ -0.02
SRSF3-201ENST00000339436 QRICH1Q2TAL8 776 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 SLC9C1Q4G0N8 1177 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 FANCBQ8NB91 859 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 SLAIN1Q8ND83 568 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 MMP19Q99542 508 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 SPZ1Q9BXG8 430 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 RIOX1Q9H6W3 641 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 ACAD9Q9H845 621 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 FBXO40Q9UH90 709 aa14.94□□□□□ -0.02
SRSF3-201ENST00000339436 PLEKHA8P1O95397 391 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 HOXC6P09630 235 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 ALAS1P13196 640 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 CYP2B6P20813 491 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 GNAQP50148 359 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 EVCP57679 992 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 KCTD2Q14681 263 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 RTN1Q16799 776 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 TMTC3Q6ZXV5 915 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 PXYLP1Q8TE99 480 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 LZTS2Q9BRK4 669 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 C22orf23Q9BZE7 217 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 PDRG1Q9NUG6 133 aa14.93□□□□□ -0.02
SRSF3-201ENST00000339436 GOLGA8AA7E2F4 631 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 ZBTB5O15062 677 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 ADCY3O60266 1144 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 ELNP15502 786 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 SMARCA1P28370 1054 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 GRK4P32298 578 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 RBM25P49756 843 aaKnown RBP14.92□□□□□ -0.02
SRSF3-201ENST00000339436 ARMC5Q96C12 935 aa14.92□□□□□ -0.02
SRSF3-201ENST00000339436 ABHD8Q96I13 439 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms