RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 EIF5BO60841 1220 aaKnown RBP13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 ICAM1P05362 532 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 ALAS1P13196 640 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 PRKAR2AP13861 404 aaKnown RBP13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 CCL14Q16627 93 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 MB21D2Q8IYB1 491 aaPredicted RBP13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 TMEM87BQ96K49 555 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 TRERF1Q96PN7 1200 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 RANBP17Q9H2T7 1088 aaKnown RBP13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 DIS3Q9Y2L1 958 aaKnown RBP13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 RIPK3Q9Y572 518 aa13.22□□□□□ -0.29
SLC28A1-202ENST00000338602 KIAA0100Q14667 2235 aaKnown RBP13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 EPB41L2O43491 1005 aaKnown RBP13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 PRC1O43663 620 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 COBLO75128 1261 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 SGPL1O95470 568 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 TFRCP02786 760 aaKnown RBP13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 HMGB1P09429 215 aaKnown RBP13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 GOLGA8HP0CJ92 632 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 EN2P19622 333 aaPredicted RBP13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 GJA8P48165 433 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 NFXL1Q6ZNB6 911 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 RASGRP2Q7LDG7 609 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 NPLOC4Q8TAT6 608 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 DEFB118Q96PH6 123 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 NEK1Q96PY6 1258 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 RNF146Q9NTX7 359 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 TAF6LQ9Y6J9 622 aa13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 COL11A1P12107 1806 aaPredicted RBP13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 MKI67P46013 3256 aaKnown RBP13.21□□□□□ -0.29
SLC28A1-202ENST00000338602 SZT2Q5T011 3432 aa13.21□□□□□ -0.3
SLC28A1-202ENST00000338602 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 PGK2P07205 417 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 SNAP25P60880 206 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 CACNB2Q08289 660 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 MAP3K21Q5TCX8 1036 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 SYNE3Q6ZMZ3 975 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 U2AF1L4Q8WU68 220 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 UBA5Q9GZZ9 404 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 PAK6Q9NQU5 681 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 A0A0C4DFX4 3053 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 PLXNB2O15031 1838 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 PFASO15067 1338 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 ZNF536O15090 1300 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 ZNF236Q9UL36 1845 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 HTTP42858 3142 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 KLRF2D3W0D1 207 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 POTEB2H3BUK9 544 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 MSCO60682 206 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 CNGA1P29973 690 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 KIF5BP33176 963 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 ANTXR2P58335 489 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 TRIM32Q13049 653 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 TRAF1Q13077 416 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 ZNF792Q3KQV3 632 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 NRBP1Q9UHY1 535 aa13.2□□□□□ -0.3
SLC28A1-202ENST00000338602 CALM1P0DP23 149 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 CALM2P0DP24 149 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 CALM3P0DP25 149 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 CYP2C19P33261 490 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 LIFRP42702 1097 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 FGD1P98174 961 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 DHX32Q7L7V1 743 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 ADGRF4Q8IZF3 695 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 TINF2Q9BSI4 451 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 VAT1LQ9HCJ6 419 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 CNPY2Q9Y2B0 182 aa13.19□□□□□ -0.3
SLC28A1-202ENST00000338602 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 PALM3A6NDB9 673 aaPredicted RBP13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 SH2B2O14492 632 aaPredicted RBP13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 DDAH1O94760 285 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 PSMA5P28066 241 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 HSPA4P34932 840 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 GNAQP50148 359 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 GRM4Q14833 912 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 ANKLE1Q8NAG6 615 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 MAF1Q9H063 256 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 LY9Q9HBG7 655 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 SLC12A7Q9Y666 1083 aa13.18□□□□□ -0.3
SLC28A1-202ENST00000338602 RBBP6Q7Z6E9 1792 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms