RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CABP7Q86V35 215 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 ZNF654Q8IZM8 581 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 AFG3L2Q9Y4W6 797 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 ZNF804BA4D1E1 1349 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 PPP1R21Q6ZMI0 780 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 NEK8Q86SG6 692 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 METTL23Q86XA0 190 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 DIS3L2Q8IYB7 885 aaKnown RBP13.47□□□□□ -0.25
FN1-202ENST00000336916 RTKN2Q8IZC4 609 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 BLIDQ8IZY5 108 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 WDR11Q9BZH6 1224 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 VCX3AQ9NNX9 186 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 UNC13BO14795 1591 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 GNAT1P11488 350 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 MIS18BP1Q6P0N0 1132 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 MAP7D3Q8IWC1 876 aa13.47□□□□□ -0.25
FN1-202ENST00000336916 ARHGAP31Q2M1Z3 1444 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 MYH3P11055 1940 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 ARHGAP25P42331 645 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 STAT2P52630 851 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 DPP9Q86TI2 863 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.46□□□□□ -0.25
FN1-202ENST00000336916 IFIH1Q9BYX4 1025 aaKnown RBP13.46□□□□□ -0.25
FN1-202ENST00000336916 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
FN1-202ENST00000336916 CBX1P83916 185 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 KCTD2Q14681 263 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 GTF3C6Q969F1 213 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 ANAPC5Q9UJX4 755 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 CD19P15391 556 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 PPARGP37231 505 aaPredicted RBP13.46□□□□□ -0.25
FN1-202ENST00000336916 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
FN1-202ENST00000336916 ANKRD36BP1Q96IX9 119 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 CTTNBP2NLQ9P2B4 639 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 ARMCX3Q9UH62 379 aaPredicted RBP13.46□□□□□ -0.25
FN1-202ENST00000336916 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 ERVV-1B6SEH8 477 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 RNF8O76064 485 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 ICA1Q05084 483 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 GPR108Q9NPR9 543 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
FN1-202ENST00000336916 MED7O43513 233 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 RXRBP28702 533 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 STX17P56962 302 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 POTEDQ86YR6 584 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 ERO1AQ96HE7 468 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 PHACTR3Q96KR7 559 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 AMNQ9BXJ7 453 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 USP19O94966 1318 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 CIITAP33076 1130 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 WWC3Q9ULE0 1092 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 PRDM15P57071 1507 aaPredicted RBP13.46□□□□□ -0.26
FN1-202ENST00000336916 TESPA1A2RU30 521 aaPredicted RBP13.46□□□□□ -0.26
FN1-202ENST00000336916 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 KRT12Q99456 494 aa13.46□□□□□ -0.26
FN1-202ENST00000336916 PPEF1O14829 653 aaPredicted RBP13.45□□□□□ -0.26
FN1-202ENST00000336916 KRT3P12035 628 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 CCND2P30279 289 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 GTF2IP78347 998 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 PKD2L1Q9P0L9 805 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 GARSP41250 739 aaKnown RBP13.45□□□□□ -0.26
FN1-202ENST00000336916 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 PALM2Q8IXS6 379 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 COPB2P35606 906 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 ADALQ6DHV7 355 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 CDKL2Q92772 493 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 PTPRKQ15262 1439 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
FN1-202ENST00000336916 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 HEXIM1O94992 359 aaKnown RBP13.45□□□□□ -0.26
FN1-202ENST00000336916 OR52Z1P0C646 297 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 TMEM191BP0C7N4 346 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 RAB20Q9NX57 234 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 STK17AQ9UEE5 414 aa13.45□□□□□ -0.26
FN1-202ENST00000336916 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 TSNAXIP1Q2TAA8 658 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 AFAP1L1Q8TED9 768 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 MCUR1Q96AQ8 359 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 TTC25Q96NG3 672 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 LOC102724428A0A0B4J2F2 783 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 PHKG2P15735 406 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 SIK1P57059 783 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 EXOC4Q96A65 974 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 SPZ1Q9BXG8 430 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 E7EWF7 191 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 CASQ2O14958 399 aaPredicted RBP13.44□□□□□ -0.26
FN1-202ENST00000336916 GKAP1Q5VSY0 366 aaPredicted RBP13.44□□□□□ -0.26
FN1-202ENST00000336916 GPBP1Q86WP2 473 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 NOSTRINQ8IVI9 506 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 RPUSD2Q8IZ73 545 aaKnown RBP13.44□□□□□ -0.26
FN1-202ENST00000336916 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 SLC7A3Q8WY07 619 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 POMGNT1Q8WZA1 660 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 A6NJR5 290 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 MYO1EQ12965 1108 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 ARHGAP27Q6ZUM4 889 aa13.44□□□□□ -0.26
FN1-202ENST00000336916 PRPF38AQ8NAV1 312 aaKnown RBP13.44□□□□□ -0.26
FN1-202ENST00000336916 NACC1Q96RE7 527 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms