RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 EFHD1Q9BUP0 239 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 DEPTORQ8TB45 409 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 RPS6KC1Q96S38 1066 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 HESX1Q9UBX0 185 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 TBC1D8O95759 1140 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 MTHFSDQ2M296 383 aaKnown RBP13.82□□□□□ -0.2
FN1-201ENST00000323926 ARHGEF2Q92974 986 aaKnown RBP13.82□□□□□ -0.2
FN1-201ENST00000323926 KRT15P19012 456 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 RAB20Q9NX57 234 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 RNF123Q5XPI4 1314 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 RNF8O76064 485 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 OATP04181 439 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 ZNF75DP51815 510 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 USP14P54578 494 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 ARHGEF16Q5VV41 709 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 MYRIPQ8NFW9 859 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 GJC1P36383 396 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 VSIG1Q86XK7 387 aa13.82□□□□□ -0.2
FN1-201ENST00000323926 FOXP1Q9H334 677 aaPredicted RBP13.82□□□□□ -0.2
FN1-201ENST00000323926 ZBTB38Q8NAP3 1195 aaPredicted RBP13.81□□□□□ -0.2
FN1-201ENST00000323926 PTPRTO14522 1441 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 EFCAB8A8MWE9 144 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 CNOT10Q9H9A5 744 aaKnown RBP13.81□□□□□ -0.2
FN1-201ENST00000323926 RGS12O14924 1447 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 F8W031 263 aaPredicted RBP13.81□□□□□ -0.2
FN1-201ENST00000323926 WDR46O15213 610 aaKnown RBP13.81□□□□□ -0.2
FN1-201ENST00000323926 TTC39CQ8N584 583 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 HAUS4Q9H6D7 363 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 GPR108Q9NPR9 543 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 ANAPC5Q9UJX4 755 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 UAP1Q16222 522 aaPredicted RBP13.81□□□□□ -0.2
FN1-201ENST00000323926 NOSTRINQ8IVI9 506 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 PALM2Q8IXS6 379 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 TNNI1P19237 187 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 GPATCH11Q8N954 259 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 KIAA1468Q9P260 1216 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 CABS1Q96KC9 395 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 RAB44Q7Z6P3 723 aaPredicted RBP13.81□□□□□ -0.2
FN1-201ENST00000323926 FAM178BQ8IXR5 827 aa13.81□□□□□ -0.2
FN1-201ENST00000323926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.8□□□□□ -0.24e-6■■■□□ 15.9
FN1-201ENST00000323926 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 DLGAP5Q15398 846 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 MIGA1Q8NAN2 632 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 TRPV6Q9H1D0 765 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 CAPN9O14815 690 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 CC2D2BQ6DHV5 1058 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 AFG3L2Q9Y4W6 797 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 IPO5O00410 1097 aaKnown RBP13.8□□□□□ -0.2
FN1-201ENST00000323926 TRIM56Q9BRZ2 755 aaKnown RBP13.8□□□□□ -0.2
FN1-201ENST00000323926 TLDC2A0PJX2 215 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 TRIM62Q9BVG3 475 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 SLC8A2Q9UPR5 921 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 MYH1P12882 1939 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 MYH2Q9UKX2 1941 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 MYH4Q9Y623 1939 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 RHOXF2BP0C7M4 288 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 PDCD2Q16342 344 aaPredicted RBP13.8□□□□□ -0.2
FN1-201ENST00000323926 PIK3AP1Q6ZUJ8 805 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 ZSCAN10Q96SZ4 725 aaPredicted RBP13.8□□□□□ -0.2
FN1-201ENST00000323926 RHOXF2Q9BQY4 288 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 ZBTB7BO15156 539 aaPredicted RBP13.8□□□□□ -0.2
FN1-201ENST00000323926 S100BP04271 92 aaPredicted RBP13.8□□□□□ -0.2
FN1-201ENST00000323926 DHTKD1Q96HY7 919 aaPredicted RBP13.8□□□□□ -0.2
FN1-201ENST00000323926 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
FN1-201ENST00000323926 PSMD2Q13200 908 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 WDR11Q9BZH6 1224 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 MRPL47Q9HD33 250 aaKnown RBP13.79□□□□□ -0.2
FN1-201ENST00000323926 CIITAP33076 1130 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 C8orf34Q49A92 452 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 ZNF215Q9UL58 517 aaPredicted RBP13.79□□□□□ -0.2
FN1-201ENST00000323926 NFE2L3Q9Y4A8 694 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 HYOU1Q9Y4L1 999 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 POLR2MP0CAP2 368 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 SYT10Q6XYQ8 523 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 TMEM206Q9H813 350 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 XRCC6P12956 609 aaKnown RBP eCLIP13.79□□□□□ -0.21e-25■■■■■ 42.4
FN1-201ENST00000323926 SLMAPQ14BN4 828 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 PSTPIP2Q9H939 334 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 MRPL40Q9NQ50 206 aaKnown RBP13.79□□□□□ -0.2
FN1-201ENST00000323926 HIP1RO75146 1068 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 ZNF131P52739 623 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 GLI2P10070 1586 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 MAGEA1P43355 309 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 LIG4P49917 911 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 ZNF174Q15697 407 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 GSDMAQ96QA5 445 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 GPCPD1Q9NPB8 672 aa13.79□□□□□ -0.2
FN1-201ENST00000323926 HEXIM1O94992 359 aaKnown RBP13.79□□□□□ -0.2
FN1-201ENST00000323926 DIS3L2Q8IYB7 885 aaKnown RBP13.79□□□□□ -0.2
FN1-201ENST00000323926 CHRNA2Q15822 529 aa13.78□□□□□ -0.2
FN1-201ENST00000323926 RILPQ96NA2 401 aa13.78□□□□□ -0.2
FN1-201ENST00000323926 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
FN1-201ENST00000323926 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
FN1-201ENST00000323926 A6NJR5 290 aa13.78□□□□□ -0.2
FN1-201ENST00000323926 B4E1Z4 1266 aa13.78□□□□□ -0.2
FN1-201ENST00000323926 FOXP2O15409 715 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms