RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 RBM46Q8TBY0 533 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 SCN7AQ01118 1682 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 STAT2P52630 851 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 LETM2Q2VYF4 491 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 CLRN2A0PK11 232 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 BICDL2A1A5D9 508 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 TMEM232C9JQI7 657 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 GCOM1H8Y6P7 765 aaPredicted RBP9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 OR52Z1P0C646 297 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 CCDC172P0C7W6 258 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 POLR2MP0CAP2 368 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 CAMK4Q16566 473 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 KIF4BQ2VIQ3 1234 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 BARHL2Q9NY43 387 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 ZNF202O95125 648 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 MCM7P33993 719 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 DAGLBQ8NCG7 672 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 C19orf81C9J6K1 198 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 KRT13P13646 458 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 GPS2Q13227 327 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 TCHPQ9BT92 498 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 EXOC1Q9NV70 894 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 ADD3Q9UEY8 706 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 SRPRBQ9Y5M8 271 aaKnown RBP9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 MYH3P11055 1940 aa9.61□□□□□ -0.87
PDLIM5-201ENST00000317968 PHACTR2O75167 634 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 SREBF2Q12772 1141 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 MTMR14Q8NCE2 650 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 ABCB11O95342 1321 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 ERLIN2O94905 339 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 ZNF543Q08ER8 600 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 ZNF174Q15697 407 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 NCAPG2Q86XI2 1143 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 PCDHA7Q9UN72 937 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 GH2P01242 217 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 RHBDL3P58872 404 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 NOM1Q5C9Z4 860 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 IFT74Q96LB3 600 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 MYOZ2Q9NPC6 264 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 LRWD1Q9UFC0 647 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 CNOT7Q9UIV1 285 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 KCNH4Q9UQ05 1017 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 AKR1B1P15121 316 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 PKP1Q13835 747 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 CALCRLQ16602 461 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 SPDYE2Q495Y8 402 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 FAM47CQ5HY64 1035 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 SV2BQ7L1I2 683 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 MSANTD4Q8NCY6 345 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 CDHR1Q96JP9 859 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 FBXO40Q9UH90 709 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 HPS5Q9UPZ3 1129 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 NID2Q14112 1375 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 CDC27P30260 824 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 PRPHP41219 470 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 UBXN2AP68543 259 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 PDE4DQ08499 809 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 JAKMIP3Q5VZ66 844 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 MTIF3Q9H2K0 278 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 ZDHHC9Q9Y397 364 aa9.6□□□□□ -0.87
PDLIM5-201ENST00000317968 KIF2AO00139 706 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 CXCL9Q07325 125 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 ZYXQ15942 572 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 GTF3C2Q8WUA4 911 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 PALM3A6NDB9 673 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 WDR46O15213 610 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 CTNND1O60716 968 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 PTPREP23469 700 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 NOP2P46087 812 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 USP17L2Q6R6M4 530 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 ELOA2Q8IYF1 753 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 LRP5O75197 1615 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 VWA3AA6NCI4 1184 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 F5H6K3 240 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 TBC1D12O60347 775 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 KLRC3Q07444 240 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 APOBEC3HQ6NTF7 200 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 ADGRA1Q86SQ6 560 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 STK17AQ9UEE5 414 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 MICALL2Q8IY33 904 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 GMCL1Q96IK5 515 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 TRIM6Q9C030 488 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 MAF1Q9H063 256 aa9.59□□□□□ -0.87
PDLIM5-201ENST00000317968 SMTNP53814 917 aa9.59□□□□□ -0.88
PDLIM5-201ENST00000317968 SEPT2Q15019 361 aa9.59□□□□□ -0.88
PDLIM5-201ENST00000317968 TKFCQ3LXA3 575 aa9.59□□□□□ -0.88
PDLIM5-201ENST00000317968 CCDC181Q5TID7 509 aa9.59□□□□□ -0.88
PDLIM5-201ENST00000317968 FAM173BQ6P4H8 233 aa9.59□□□□□ -0.88
PDLIM5-201ENST00000317968 NSMFQ6X4W1 530 aa9.59□□□□□ -0.88
PDLIM5-201ENST00000317968 ANKRD35Q8N283 1001 aa9.59□□□□□ -0.88
PDLIM5-201ENST00000317968 FAM13AO94988 1023 aa9.58□□□□□ -0.88
PDLIM5-201ENST00000317968 EEF2P13639 858 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-201ENST00000317968 CCDC65Q8IXS2 484 aa9.58□□□□□ -0.88
PDLIM5-201ENST00000317968 PRPF38AQ8NAV1 312 aaKnown RBP9.58□□□□□ -0.88
PDLIM5-201ENST00000317968 GMCL1P1Q8NEA9 526 aa9.58□□□□□ -0.88
PDLIM5-201ENST00000317968 IQCDQ96DY2 449 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms