RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 PDZD4Q76G19 769 aaPredicted RBP7.95□□□□□ -1.14
SOX6-201ENST00000316399 SND1Q7KZF4 910 aaKnown RBP eCLIP7.95□□□□□ -1.14
SOX6-201ENST00000316399 SEC62Q99442 399 aaKnown RBP7.95□□□□□ -1.14
SOX6-201ENST00000316399 IFT122Q9HBG6 1241 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 CPSF2Q9P2I0 782 aaKnown RBP7.95□□□□□ -1.14
SOX6-201ENST00000316399 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 FAN1Q9Y2M0 1017 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 GMNNO75496 209 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 ALDH1B1P30837 517 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 PPP2R5AQ15172 486 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 ALX1Q15699 326 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 PBKQ96KB5 322 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 FAM204AQ9H8W3 233 aa7.95□□□□□ -1.14
SOX6-201ENST00000316399 ACTR5Q9H9F9 607 aaPredicted RBP7.95□□□□□ -1.14
SOX6-201ENST00000316399 EPN1Q9Y6I3 576 aaPredicted RBP7.95□□□□□ -1.14
SOX6-201ENST00000316399 KIF3CO14782 793 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 JAK2O60674 1132 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 TROVE2P10155 538 aaKnown RBP eCLIP7.94□□□□□ -1.14
SOX6-201ENST00000316399 BIRC3Q13489 604 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 DGKHQ86XP1 1220 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 SLF1Q9BQI6 1058 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 EDEM3Q9BZQ6 932 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 Q9H521 79 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 NRKQ7Z2Y5 1582 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 PGRMC1O00264 195 aaKnown RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 H2AFZP0C0S5 128 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 TTLL7Q6ZT98 887 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 H2AFVQ71UI9 128 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 PPP1R12CQ9BZL4 782 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 LARSQ9P2J5 1176 aaKnown RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 SERTAD1Q9UHV2 236 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 FAM169AQ9Y6X4 670 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 WDR17Q8IZU2 1322 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 CCDC188H7C350 402 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 CEP104O60308 925 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 ZAP70P43403 619 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 SARNPP82979 210 aaKnown RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 SCRN1Q12765 414 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 MAN2A1Q16706 1144 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 FAM26FQ5R3K3 315 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 ZNF658Q5TYW1 1059 aaPredicted RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 ARHGEF25Q86VW2 580 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 LARP4BQ92615 738 aaKnown RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 XDHP47989 1333 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 FBLN1P23142 703 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 RPS8P62241 208 aaKnown RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 NBPF9Q3BBW0 867 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 VPS16Q9H269 839 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 DNAJC5BQ9UF47 199 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 C2CD5Q86YS7 1000 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 NECTIN1Q15223 517 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 HHATQ5VTY9 493 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 CCDC105Q8IYK2 499 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 TMX1Q9H3N1 280 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 ASIC3Q9UHC3 531 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 ROBO2Q9HCK4 1378 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 MIF4GDA9UHW6 222 aaKnown RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 GNPATO15228 680 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 POLR2BP30876 1174 aaKnown RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 OTUD6AQ7L8S5 288 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 JPH2Q9BR39 696 aaPredicted RBP7.94□□□□□ -1.14
SOX6-201ENST00000316399 TCHPQ9BT92 498 aa7.94□□□□□ -1.14
SOX6-201ENST00000316399 A0A087WUV0 522 aaPredicted RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 TARSL2A2RTX5 802 aaKnown RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 GRID2IPA4D2P6 1211 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 PICALMQ13492 652 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 RASEFQ8IZ41 740 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 RNF10Q8N5U6 811 aaKnown RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 SMC1BQ8NDV3 1235 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 LEMD3Q9Y2U8 911 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 ARID5AQ03989 594 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 RESTQ13127 1097 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 HSP90AA4PQ58FG1 418 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 ARHGAP27Q6ZUM4 889 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 VCX3AQ9NNX9 186 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 CCNL1Q9UK58 526 aaPredicted RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 NSFL1CQ9UNZ2 370 aaKnown RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 COMMD10Q9Y6G5 202 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 FGAP02671 866 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 C1orf112Q9NSG2 853 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 SRPRBQ9Y5M8 271 aaKnown RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 SMCO2A6NFE2 343 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 GNPTABQ3T906 1256 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 CEP85LQ5SZL2 805 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 CLEC4GQ6UXB4 293 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 PNMA1Q8ND90 353 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 PI4K2BQ8TCG2 481 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 THEGQ9P2T0 379 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 MRPL11Q9Y3B7 192 aaKnown RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 CYP21A2P08686 494 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 AP3B2Q13367 1082 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 RESP18Q5W5W9 173 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 CHST3Q7LGC8 479 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 SYMPKQ92797 1274 aaKnown RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 SUDS3Q9H7L9 328 aaPredicted RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 MRPL44Q9H9J2 332 aaKnown RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 LGR6Q9HBX8 967 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 TECPR2O15040 1411 aa7.93□□□□□ -1.14
SOX6-201ENST00000316399 HPDP32754 393 aaPredicted RBP7.93□□□□□ -1.14
SOX6-201ENST00000316399 TIMM10P62072 90 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms