RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 GNPATO15228 680 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 LONP1P36776 959 aaKnown RBP11.39□□□□□ -0.59
COPB1-201ENST00000249923 PPFIBP1Q86W92 1011 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 DGKHQ86XP1 1220 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 GPR161Q8N6U8 529 aaKnown RBP11.39□□□□□ -0.59
COPB1-201ENST00000249923 ARHGEF1Q92888 912 aaKnown RBP11.39□□□□□ -0.59
COPB1-201ENST00000249923 CTAGE1Q96RT6 745 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 TMEM47Q9BQJ4 181 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 KBTBD4Q9NVX7 518 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 PALM3A6NDB9 673 aaPredicted RBP11.39□□□□□ -0.59
COPB1-201ENST00000249923 RHOXF2BP0C7M4 288 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 AMPD2Q01433 879 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 ZNF569Q5MCW4 686 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 TGFBRAP1Q8WUH2 860 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 SETDB2Q96T68 719 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 DUSP9Q99956 384 aaKnown RBP11.39□□□□□ -0.59
COPB1-201ENST00000249923 RHOXF2Q9BQY4 288 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 RTFDC1Q9BY42 306 aaPredicted RBP11.39□□□□□ -0.59
COPB1-201ENST00000249923 KAT14Q9H8E8 782 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
COPB1-201ENST00000249923 H3BQF6 201 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 RABGGTAQ92696 567 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 HPS3Q969F9 1004 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 TTYH3Q9C0H2 523 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 BARHL2Q9NY43 387 aa11.39□□□□□ -0.59
COPB1-201ENST00000249923 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 PARP1P09874 1014 aaKnown RBP11.38□□□□□ -0.59
COPB1-201ENST00000249923 STAT6P42226 847 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 ST5P78524 1137 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 TTI2Q6NXR4 508 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 DZIP1Q86YF9 867 aaKnown RBP11.38□□□□□ -0.59
COPB1-201ENST00000249923 CNGA4Q8IV77 575 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 GPATCH11Q8N954 259 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 SLF1Q9BQI6 1058 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 MMTAG2Q9BU76 263 aaKnown RBP11.38□□□□□ -0.59
COPB1-201ENST00000249923 SH3GLB2Q9NR46 395 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 RCCD1A6NED2 376 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 TXLNAP40222 546 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 HERVK_113P62684 666 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 TAF3Q5VWG9 929 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 HEATR3Q7Z4Q2 680 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 MAPKAPK5Q8IW41 473 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 DAGLBQ8NCG7 672 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 VPS18Q9P253 973 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 LY75O60449 1722 aa11.38□□□□□ -0.59
COPB1-201ENST00000249923 CHMP4BP1P59074 171 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 TXNRD1Q16881 649 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 GOLGA6L1Q8N7Z2 621 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 NOA1Q8NC60 698 aaKnown RBP11.37□□□□□ -0.59
COPB1-201ENST00000249923 GIMAP8Q8ND71 665 aaPredicted RBP11.37□□□□□ -0.59
COPB1-201ENST00000249923 ANKRD2Q9GZV1 360 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 RSPH14Q9UHP6 348 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 CDC23Q9UJX2 597 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 OAS2P29728 719 aaKnown RBP11.37□□□□□ -0.59
COPB1-201ENST00000249923 KRT9P35527 623 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 AGPAT5Q9NUQ2 364 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 TMEM51Q9NW97 253 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 NHSQ6T4R5 1651 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 FOCADQ5VW36 1801 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 RHOBTB3O94955 611 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 FCER1AP12319 257 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 PLCG1P19174 1290 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 KIF5BP33176 963 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 UBXN1Q04323 297 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 STK4Q13043 487 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 LEKR1Q6ZMV7 388 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 GOLGA1Q92805 767 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 NUP88Q99567 741 aaPredicted RBP11.37□□□□□ -0.59
COPB1-201ENST00000249923 DNAJC7Q99615 494 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 HDAC6Q9UBN7 1215 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 UTRNP46939 3433 aa11.37□□□□□ -0.59
COPB1-201ENST00000249923 MAP2K7O14733 419 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 CYP2C19P33261 490 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 HSP90B2PQ58FF3 399 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 NCAPH2Q6IBW4 605 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 STX8Q9UNK0 236 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 LGALS16A8MUM7 142 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 LDHBP07195 334 aaKnown RBP11.36□□□□□ -0.59
COPB1-201ENST00000249923 CALML3P27482 149 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 USP5P45974 858 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 LONRF2Q1L5Z9 754 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 MIIPQ5JXC2 388 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 BEND6Q5SZJ8 279 aaPredicted RBP11.36□□□□□ -0.59
COPB1-201ENST00000249923 DTHD1Q6ZMT9 781 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 CCDC51Q96ER9 411 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 NYXQ9GZU5 481 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 ZMYND12Q9H0C1 365 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 TCP11L1Q9NUJ3 509 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.36□□□□□ -0.59
COPB1-201ENST00000249923 LTBP1Q14766 1721 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 ADAMTSL1Q8N6G6 1762 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 B4DLN1 442 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 TSPY3P0CV98 308 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 TSPY8P0CW00 308 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 KCNB1Q14721 858 aa11.36□□□□□ -0.59
COPB1-201ENST00000249923 KIF4BQ2VIQ3 1234 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms