RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Ano2Q8CFW1 1002 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Onecut3Q8K557 490 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 GlyctkQ8QZY2 523 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Klhl40Q9D783 621 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Cd274Q9EP73 290 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Mtmr2Q9Z2D1 643 aa17.51■□□□□ 0.39
Vcan-201ENSMUST00000109543 Paxbp1P58501 919 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Gng11P61953 73 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Pknox2Q8BG99 474 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 WaslQ91YD9 501 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Alpk1Q9CXB8 1231 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Mis18aQ9CZJ6 204 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ugt1a8D3Z748 530 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ugt1a10E9PXN7 530 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Gdf10P97737 476 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Kcnb1Q03717 857 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Map3k12Q60700 888 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Tomm22Q9CPQ3 142 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 AmfrQ9R049 643 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Pcdh11xF6ZNL5 1338 aa17.5■□□□□ 0.39
Vcan-201ENSMUST00000109543 Samd1D3YXK1 519 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Vcam1P29533 739 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ccdc102aQ3TMW1 549 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Psg29Q3URN6 468 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Skor1Q8BX46 964 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Tcp11l2Q8K1H7 517 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ptf1aQ9QX98 324 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ddx23D3Z0M9 819 aaKnown RBP17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Zfand4D3Z3C6 739 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Traf1P39428 409 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Nom1Q3UFM5 854 aaKnown RBP17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Trim25Q61510 634 aaKnown RBP17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Atp2b4Q6Q477 1205 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ttll1Q91V51 423 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Kctd10Q922M3 315 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Sept14Q9DA97 430 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ambra1A2AH22 1300 aa17.49■□□□□ 0.39
Vcan-201ENSMUST00000109543 Sap30bpQ02614 308 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ttbk2Q3UVR3 1243 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Fam196bQ6GQV1 535 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Haus6Q6NV99 933 aaKnown RBP17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Q8C5C9 218 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Tmem63cQ8CBX0 802 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ushbp1Q8R370 680 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Fam76aQ922G2 307 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Inpp4aQ9EPW0 939 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Prl2c5Q9JLV9 222 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 ChmQ9QXG2 665 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Gm5580A0A0N4SVP8 411 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Parp1P11103 1013 aaKnown RBP17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Fdx1P46656 188 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Scnn1aQ61180 699 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ppp1r11Q8K1L5 131 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 EhhadhQ9DBM2 718 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Pkd2l2Q9JLG4 621 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Nlrp5Q9R1M5 1163 aa17.48■□□□□ 0.39
Vcan-201ENSMUST00000109543 Nme9A0A1L1SUL6 329 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Pola2P33611 600 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Stim1P70302 685 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Uri1Q3TLD5 531 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Oxr1Q4KMM3 866 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Igbp1Q61249 340 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Kcnj11Q61743 390 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Ccdc172Q810N9 267 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Trim9Q8C7M3 817 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Chrna2Q91X60 512 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 MymkQ9D1N4 221 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Golgb1E9PVZ8 3238 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Mrps31Q61733 384 aaKnown RBP17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Asic1Q6NXK8 526 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Klhl10Q9D5V2 608 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Myoz2Q9JJW5 264 aa17.47■□□□□ 0.39
Vcan-201ENSMUST00000109543 Gm5934D3Z4U6 212 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Nfatc2ipO09130 412 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Sema3fO88632 785 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Cacnb3P54285 484 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Prpf40bQ80W14 870 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Q8C6G1 249 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Tmem134Q8R0J4 195 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Git2Q9JLQ2 708 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Uso1Q9Z1Z0 959 aaKnown RBP17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Mtcl1Q3UHU5 1945 aa17.46■□□□□ 0.39
Vcan-201ENSMUST00000109543 Kctd1Q5M956 257 aa17.46■□□□□ 0.38
Vcan-201ENSMUST00000109543 Kdm1aQ6ZQ88 853 aa17.46■□□□□ 0.38
Vcan-201ENSMUST00000109543 Arhgef19Q8BWA8 802 aa17.46■□□□□ 0.38
Vcan-201ENSMUST00000109543 Exoc1Q8R3S6 894 aa17.46■□□□□ 0.38
Vcan-201ENSMUST00000109543 Yipf1Q91VU1 306 aa17.46■□□□□ 0.38
Vcan-201ENSMUST00000109543 Kif23E9Q5G3 953 aa17.45■□□□□ 0.38
Vcan-201ENSMUST00000109543 Hmgb2P30681 210 aaKnown RBP17.45■□□□□ 0.38
Vcan-201ENSMUST00000109543 Psmb7P70195 277 aa17.45■□□□□ 0.38
Vcan-201ENSMUST00000109543 Foxn3Q499D0 457 aa17.45■□□□□ 0.38
Vcan-201ENSMUST00000109543 CrkQ64010 304 aa17.45■□□□□ 0.38
Vcan-201ENSMUST00000109543 Egfl6Q9JJZ5 550 aa17.45■□□□□ 0.38
Vcan-201ENSMUST00000109543 Pitpnm2Q6ZPQ6 1335 aa17.45■□□□□ 0.38
Vcan-201ENSMUST00000109543 Col5a2Q3U962 1497 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Rsbn1lD3Z0K6 821 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Lrrc32G3XA59 663 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Nol4P60954 483 aa17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Ssrp1Q08943 708 aaKnown RBP17.44■□□□□ 0.38
Vcan-201ENSMUST00000109543 Krt87Q6IMF0 495 aa17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 132.6 ms