RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Stk11ipQ3TAA7 1072 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Slc16a10Q3U9N9 512 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Slc10a5Q5PT54 434 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 NfkbibQ60778 359 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Spata21Q8BHW6 681 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Pm20d1Q8C165 503 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Sik2Q8CFH6 931 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Fam193aQ8CGI1 1231 aaKnown RBP10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Krtcap3Q8K177 240 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rnf112Q96DY5 654 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Bap1Q99PU7 728 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Slc5a4aQ9ET37 656 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Kif21bQ9QXL1 1668 aa10.24□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gucy2dA0A0U1RPR8 1117 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gbp4A4UUI3 631 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Unc13dB2RUP2 1085 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Zfp275G3X904 499 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Nudt1P53368 156 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 MamstrQ0ZCJ7 421 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rsph3aQ3UFY4 516 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Casc4Q6P2L7 435 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Baiap3Q80TT2 1134 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Olfml1Q8BSH2 233 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Def6Q8C2K1 630 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Pmepa1Q9D7R2 260 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rnf138rt1Q9D9M9 248 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 GsdmaQ9EST1 446 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Limd1Q9QXD8 668 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cpb1B2RS76 415 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ttc17E9PVB5 1198 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Arfip1G5E8V9 373 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rad51bO35719 350 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 UmpsP13439 481 aaKnown RBP10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Kcnj4P52189 445 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Csrnp1P59054 583 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Pdlim7Q3TJD7 457 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Acbd5Q5XG73 508 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Trim21Q62191 470 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Fan1Q69ZT1 1020 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tbc1d30Q69ZT9 766 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ints3Q7TPD0 1041 aaKnown RBP10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 PogkQ80TC5 607 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 RimklbQ80WS1 387 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 4933430I17RikQ8BHW4 495 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ccdc65Q8VHI7 493 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Mfsd10Q9D2V8 456 aaKnown RBP10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 SynrgQ5SV85 1306 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tns3Q5SSZ5 1440 aa10.23□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Sppl2cA2A6C4 690 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Hsd17b7O88736 334 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Krt10P02535 570 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gnrh1P13562 90 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Vps45P97390 570 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gsdma2Q32M21 443 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 GapdhsQ64467 440 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Fut11Q8BHC9 489 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tmc7Q8C428 726 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Gas2l1Q8JZP9 678 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Zkscan3Q91VW9 553 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ncoa5Q91W39 579 aaKnown RBP10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Srgap2Q91Z67 1071 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 PdgfdQ925I7 370 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Abcb6Q9DC29 842 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Psmd7P26516 321 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Stmn1P54227 149 aaKnown RBP10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Brd9Q3UQU0 596 aaKnown RBP10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Krt14Q61781 484 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Fam196bQ6GQV1 535 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ago2Q8CJG0 860 aaKnown RBP10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Camkk1Q8VBY2 505 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Mageb16Q9CWV4 363 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 SarnpQ9D1J3 210 aaKnown RBP10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Bcl2l12Q9D3J3 255 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Syde1Q9DBZ9 737 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 SerhlQ9EPB5 311 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 PyglQ9ET01 850 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Rbck1Q9WUB0 508 aa10.22□□□□□ -0.77
Upf3b-201ENSMUST00000076265 MtrA6H5Y3 1253 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 2310061I04RikB8JJ69 315 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Stra6O70491 670 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Tom1O88746 492 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 RnaselQ05921 735 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cdca2Q14B71 982 aaKnown RBP10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Arl6ip6Q8BH07 226 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Skor1Q8BX46 964 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Slc44a2Q8BY89 706 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Klhl11Q8CE33 709 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Dnaaf4Q8R368 420 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Nmrk1Q91W63 195 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 St7Q99M96 577 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Ankef1Q9D2J7 775 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Il21Q9ES17 146 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Adam28Q9JLN6 793 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Magea2Q9R2A2 320 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Map3k14Q9WUL6 942 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Dot1lQ6XZL8 1540 aa10.21□□□□□ -0.77
Upf3b-201ENSMUST00000076265 Cdk13Q69ZA1 1511 aaKnown RBP10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ppip5k1A2ARP1 1436 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pik3r4Q8VD65 1358 aa10.21□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Glt1d1A4FUP9 346 aa10.21□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms