RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W RPL22BP56628 122 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W ECM7Q06200 448 aa3.72□□□□□ -1.81
SWI1YPL016W DBP9Q06218 594 aaKnown RBP3.72□□□□□ -1.81
SWI1YPL016W YPR196WQ06595 470 aa3.72□□□□□ -1.81
SWI1YPL016W YDL121CQ07541 149 aa3.72□□□□□ -1.81
SWI1YPL016W MLH3Q12083 715 aa3.72□□□□□ -1.81
SWI1YPL016W MCD1Q12158 566 aa3.72□□□□□ -1.81
SWI1YPL016W GIS3Q12418 502 aa3.72□□□□□ -1.81
SWI1YPL016W FOB1O13329 566 aa3.71□□□□□ -1.82
SWI1YPL016W COX4P04037 155 aa3.71□□□□□ -1.82
SWI1YPL016W YGL041W-AP0C5N3 154 aa3.71□□□□□ -1.82
SWI1YPL016W YEL076C-AP0CX16 216 aa3.71□□□□□ -1.82
SWI1YPL016W YLR464WP0CX17 216 aa3.71□□□□□ -1.82
SWI1YPL016W SYP1P25623 870 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W YEL076CP39971 216 aa3.71□□□□□ -1.82
SWI1YPL016W JLP2P40206 208 aa3.71□□□□□ -1.82
SWI1YPL016W YMR147WP40218 223 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W ALA1P40825 983 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W GPD2P41911 440 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W RMR1P53060 241 aa3.71□□□□□ -1.82
SWI1YPL016W YBP2P53169 641 aa3.71□□□□□ -1.82
SWI1YPL016W CPR6P53691 371 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W MUK1Q02866 612 aa3.71□□□□□ -1.82
SWI1YPL016W YMR187CQ03236 431 aa3.71□□□□□ -1.82
SWI1YPL016W YML037CQ03703 340 aa3.71□□□□□ -1.82
SWI1YPL016W YAP7Q08182 245 aa3.71□□□□□ -1.82
SWI1YPL016W NGL1Q08213 363 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W SCP1Q08873 200 aa3.71□□□□□ -1.82
SWI1YPL016W AEP3Q12089 606 aa3.71□□□□□ -1.82
SWI1YPL016W CYR1P08678 2026 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W THS1P04801 734 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W HXK1P04806 485 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W SEC18P18759 758 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W LDS1P31379 325 aa3.71□□□□□ -1.82
SWI1YPL016W SCM4P32564 187 aa3.71□□□□□ -1.82
SWI1YPL016W SAS3P34218 831 aa3.71□□□□□ -1.82
SWI1YPL016W ORC6P38826 435 aa3.71□□□□□ -1.82
SWI1YPL016W MIT1P40002 666 aa3.71□□□□□ -1.82
SWI1YPL016W RPL10P41805 221 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W PFA3P42836 336 aa3.71□□□□□ -1.82
SWI1YPL016W ASE1P50275 885 aa3.71□□□□□ -1.82
SWI1YPL016W SOL4P53315 255 aa3.71□□□□□ -1.82
SWI1YPL016W YPL062WQ02781 134 aa3.71□□□□□ -1.82
SWI1YPL016W FMP45Q07651 309 aa3.71□□□□□ -1.82
SWI1YPL016W IZH3Q07959 543 aa3.71□□□□□ -1.82
SWI1YPL016W MCH5Q08777 521 aa3.71□□□□□ -1.82
SWI1YPL016W LAG2Q92325 660 aa3.71□□□□□ -1.82
SWI1YPL016W SNF4P12904 322 aa3.71□□□□□ -1.82
SWI1YPL016W MET8P15807 274 aa3.71□□□□□ -1.82
SWI1YPL016W SEC1P30619 724 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W ARO7P32178 256 aa3.71□□□□□ -1.82
SWI1YPL016W CYS4P32582 507 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W SAC6P32599 642 aaKnown RBP3.71□□□□□ -1.82
SWI1YPL016W YPK3P38070 525 aa3.71□□□□□ -1.82
SWI1YPL016W EDS1P38073 919 aa3.71□□□□□ -1.82
SWI1YPL016W ECM10P39987 644 aa3.71□□□□□ -1.82
SWI1YPL016W SER33P40510 469 aa3.71□□□□□ -1.82
SWI1YPL016W SAP4P53036 818 aa3.71□□□□□ -1.82
SWI1YPL016W SLG1P54867 378 aa3.71□□□□□ -1.82
SWI1YPL016W REX3Q12090 404 aa3.71□□□□□ -1.82
SWI1YPL016W ATG11Q12527 1178 aa3.71□□□□□ -1.82
SWI1YPL016W PET9P18239 318 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W PRI2P20457 528 aa3.7□□□□□ -1.82
SWI1YPL016W CCA1P21269 546 aa3.7□□□□□ -1.82
SWI1YPL016W IMP2'P32351 346 aa3.7□□□□□ -1.82
SWI1YPL016W SMY1P32364 656 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W NUP2P32499 720 aa3.7□□□□□ -1.82
SWI1YPL016W PTM1P32857 523 aa3.7□□□□□ -1.82
SWI1YPL016W SUI1P32911 108 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W YIR035CP40579 254 aa3.7□□□□□ -1.82
SWI1YPL016W ALK1P43633 760 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W YJL043WP47053 257 aa3.7□□□□□ -1.82
SWI1YPL016W TRF5P48561 642 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W SCW11P53189 542 aa3.7□□□□□ -1.82
SWI1YPL016W YDR090CQ03193 310 aa3.7□□□□□ -1.82
SWI1YPL016W GTB1Q04924 702 aa3.7□□□□□ -1.82
SWI1YPL016W MRP2P10663 115 aaPredicted RBP3.7□□□□□ -1.82
SWI1YPL016W NSP1P14907 823 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W STI1P15705 589 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
SWI1YPL016W REB1P21538 810 aa3.7□□□□□ -1.82
SWI1YPL016W PEX34P25584 144 aa3.7□□□□□ -1.82
SWI1YPL016W VAM7P32912 316 aa3.7□□□□□ -1.82
SWI1YPL016W NTR2P36118 322 aaPredicted RBP3.7□□□□□ -1.82
SWI1YPL016W RIM11P38615 370 aa3.7□□□□□ -1.82
SWI1YPL016W AKR1P39010 764 aa3.7□□□□□ -1.82
SWI1YPL016W SWD1P39706 426 aa3.7□□□□□ -1.82
SWI1YPL016W NPR2P39923 615 aa3.7□□□□□ -1.82
SWI1YPL016W COG5P53951 403 aa3.7□□□□□ -1.82
SWI1YPL016W LDB17Q12342 491 aa3.7□□□□□ -1.82
SWI1YPL016W PNS1Q12412 539 aa3.7□□□□□ -1.82
SWI1YPL016W RRD2Q12461 358 aa3.7□□□□□ -1.82
SWI1YPL016W MIS1P09440 975 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W TIF1P10081 395 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W HOM2P13663 365 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W SRO9P25567 434 aaKnown RBP3.7□□□□□ -1.82
SWI1YPL016W MIG1P27705 504 aa3.7□□□□□ -1.82
SWI1YPL016W MRP4P32902 394 aa3.7□□□□□ -1.82
SWI1YPL016W ZRT3P34240 503 aa3.7□□□□□ -1.82
SWI1YPL016W YBL036CP38197 257 aa3.7□□□□□ -1.82
SWI1YPL016W STS1P38637 319 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms