RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	MTG2	P38860	518 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	YHR219W	P38900	624 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	EDC3	P39998	551 aa	Known RBP	4.74	□□□□□ -1.65
RCL1	YOL010W	VAC7	P53950	1165 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	EBS1	Q03466	884 aa	Known RBP	4.74	□□□□□ -1.65
RCL1	YOL010W	ARA2	Q04212	335 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	ARG7	Q04728	441 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	YLR297W	Q05899	129 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	AAD4	Q07747	329 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	SPO75	Q07798	868 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	YOL075C	Q08234	1294 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	AFT2	Q08957	416 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	EMP46	Q12396	444 aa		4.74	□□□□□ -1.65
RCL1	YOL010W	HIS1	P00498	297 aa	Known RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	PPR1	P07272	904 aa	Predicted RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	MPH2	P0CD99	609 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	MTF2	P10849	440 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	GLN4	P13188	809 aa	Known RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	SCL1	P21243	252 aa	Known RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	RPA135	P22138	1203 aa	Known RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	MRC1	P25588	1096 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	SIN4	P32259	974 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	NTH1	P32356	751 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	PLC1	P32383	869 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	KAR9	P32526	644 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	TOM20	P35180	183 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	CSG2	P35206	410 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	KAP104	P38217	918 aa	Known RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	SPT8	P38915	602 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	ERP2	P39704	215 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	SNG1	P46950	547 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	SET2	P46995	733 aa	Known RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	ASK10	P48361	1146 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	RCF1	Q03713	159 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	GFD1	Q04839	188 aa	Known RBP	4.73	□□□□□ -1.65
RCL1	YOL010W	ESC2	Q06340	456 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	KCS1	Q12494	1050 aa		4.73	□□□□□ -1.65
RCL1	YOL010W	DYN1	P36022	4092 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	YPR089W	O13585	888 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	ENA1	P13587	1091 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	ADH7	P25377	361 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
RCL1	YOL010W	MRP4	P32902	394 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	SRB2	P34162	210 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	BLI1	P35727	113 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	CUE2	P36075	443 aa	Known RBP	4.72	□□□□□ -1.65
RCL1	YOL010W	CBR1	P38626	284 aa	Known RBP	4.72	□□□□□ -1.65
RCL1	YOL010W	LRP1	P38801	184 aa	Known RBP	4.72	□□□□□ -1.65
RCL1	YOL010W	ZRG8	P40021	1076 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	DJP1	P40564	432 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	QRI1	P43123	477 aa	Known RBP	4.72	□□□□□ -1.65
RCL1	YOL010W	SPC105	P53148	917 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	HOP2	P53187	214 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	NNF2	P53253	936 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	ENA2	Q01896	1091 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	TRM8	Q12009	286 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	VPS68	Q12016	184 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	ENA5	Q12691	1091 aa		4.72	□□□□□ -1.65
RCL1	YOL010W	MIS1	P09440	975 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	PMA2	P19657	947 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	ADY2	P25613	283 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	ATG15	P25641	520 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	GSY2	P27472	705 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	HOG1	P32485	435 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	PET309	P32522	965 aa	Predicted RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	CDC13	P32797	924 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	SRP72	P38688	640 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	FSH1	P38777	243 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	CCT6	P39079	546 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	PRM9	P39551	298 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	SEC27	P41811	889 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	TFG2	P41896	400 aa	Predicted RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	GAT1	P43574	510 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	AIP1	P46680	615 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	ASN2	P49090	572 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	HSV2	P50079	448 aa	Predicted RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	TEP1	P53916	434 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	SIW14	P53965	281 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	INA17	Q02888	182 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	RSF1	Q05043	376 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	YDR338C	Q05497	695 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	YLR040C	Q07988	224 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	PLB3	Q08108	686 aa		4.71	□□□□□ -1.66
RCL1	YOL010W	NEW1	Q08972	1196 aa	Known RBP	4.71	□□□□□ -1.66
RCL1	YOL010W	CDC33	P07260	213 aa	Known RBP	4.7	□□□□□ -1.66
RCL1	YOL010W	ILS1	P09436	1072 aa	Known RBP	4.7	□□□□□ -1.66
RCL1	YOL010W	TUB3	P09734	445 aa	Known RBP	4.7	□□□□□ -1.66
RCL1	YOL010W	HOP1	P20050	605 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	RAD51	P25454	400 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	SYP1	P25623	870 aa	Known RBP	4.7	□□□□□ -1.66
RCL1	YOL010W	NIP100	P33420	868 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	EMC3	P36039	253 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	ALY1	P36117	915 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	PMC1	P38929	1173 aa	Predicted RBP	4.7	□□□□□ -1.66
RCL1	YOL010W	SAP185	P40856	1058 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	CHA4	P43634	648 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	SWC4	P53201	476 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	PEX31	P53203	462 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	IPI3	P53877	555 aa		4.7	□□□□□ -1.66
RCL1	YOL010W	YMR160W	Q03823	816 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms