RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	RPS26B	P39939	119 aa	Known RBP	5	□□□□□ -1.61
SEC39	YLR440C	RPH1	P39956	796 aa		5	□□□□□ -1.61
SEC39	YLR440C	YER085C	P40058	173 aa		5	□□□□□ -1.61
SEC39	YLR440C	QDR1	P40475	563 aa		5	□□□□□ -1.61
SEC39	YLR440C	OTU1	P43558	301 aa		5	□□□□□ -1.61
SEC39	YLR440C	NPA3	P47122	385 aa		5	□□□□□ -1.61
SEC39	YLR440C	ASK10	P48361	1146 aa		5	□□□□□ -1.61
SEC39	YLR440C	YGR117C	P53270	476 aa		5	□□□□□ -1.61
SEC39	YLR440C	PRM1	P53835	661 aa		5	□□□□□ -1.61
SEC39	YLR440C	CNM67	P53865	581 aa	Known RBP	5	□□□□□ -1.61
SEC39	YLR440C	YMR265C	Q03508	461 aa	Known RBP	5	□□□□□ -1.61
SEC39	YLR440C	YMR010W	Q03687	405 aa		5	□□□□□ -1.61
SEC39	YLR440C	PEX12	Q04370	399 aa		5	□□□□□ -1.61
SEC39	YLR440C	BCH1	Q05029	724 aa		5	□□□□□ -1.61
SEC39	YLR440C	DPL1	Q05567	589 aa		5	□□□□□ -1.61
SEC39	YLR440C	MSC3	Q05812	728 aa		5	□□□□□ -1.61
SEC39	YLR440C	YLR173W	Q06247	608 aa		5	□□□□□ -1.61
SEC39	YLR440C	YLL007C	Q07799	665 aa		5	□□□□□ -1.61
SEC39	YLR440C	GPI13	Q07830	1017 aa		5	□□□□□ -1.61
SEC39	YLR440C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
SEC39	YLR440C	GPA2	P10823	449 aa		5	□□□□□ -1.61
SEC39	YLR440C	PRI2	P20457	528 aa		5	□□□□□ -1.61
SEC39	YLR440C	MRM1	P25270	412 aa		5	□□□□□ -1.61
SEC39	YLR440C	HXT3	P32466	567 aa	Known RBP	5	□□□□□ -1.61
SEC39	YLR440C	ELF1	P36053	145 aa		5	□□□□□ -1.61
SEC39	YLR440C	RCK2	P38623	610 aa		5	□□□□□ -1.61
SEC39	YLR440C	TIF11	P38912	153 aa	Known RBP	5	□□□□□ -1.61
SEC39	YLR440C	FAA3	P39002	694 aa		5	□□□□□ -1.61
SEC39	YLR440C	ALG8	P40351	577 aa		5	□□□□□ -1.61
SEC39	YLR440C	GAB1	P41733	394 aa		5	□□□□□ -1.61
SEC39	YLR440C	TDA10	P42938	290 aa		5	□□□□□ -1.61
SEC39	YLR440C	MSE1	P48525	536 aa		5	□□□□□ -1.61
SEC39	YLR440C	PRP31	P49704	494 aa	Predicted RBP	5	□□□□□ -1.61
SEC39	YLR440C	OGG1	P53397	376 aa	Predicted RBP	5	□□□□□ -1.61
SEC39	YLR440C	RUB1	Q03919	77 aa		5	□□□□□ -1.61
SEC39	YLR440C	SWF1	Q04629	336 aa		5	□□□□□ -1.61
SEC39	YLR440C	OPI10	Q08202	246 aa		5	□□□□□ -1.61
SEC39	YLR440C	NCA2	Q12374	616 aa		5	□□□□□ -1.61
SEC39	YLR440C	GCN4	P03069	281 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	PHO4	P07270	312 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	CKI1	P20485	582 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	FUN26	P31381	517 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	TCA17	P32613	152 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	KES1	P35844	434 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	VPS21	P36017	210 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	PTC4	P38089	393 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	FES1	P38260	290 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	NEM1	P38757	446 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	DDI1	P40087	428 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	YGL204C	P53089	101 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	YGL082W	P53155	381 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	TWF1	P53250	332 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	DIA1	P54005	336 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	GCN5	Q03330	439 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	RSM24	Q03976	319 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	CIA1	Q05583	330 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	RGC1	Q06108	1083 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	YLR456W	Q06199	204 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	HBT1	Q07653	1046 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	VAM3	Q12241	283 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	TUB2	P02557	457 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	RPL25	P04456	142 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	RPP2A	P05319	106 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	LEU4	P06208	619 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	RPL35A	P0CX84	120 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	RPL35B	P0CX85	120 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	ATP7	P30902	174 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	YKU70	P32807	602 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	GPT2	P36148	743 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	CDS1	P38221	457 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	PCM1	P38628	557 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	KSP1	P38691	1029 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	WSS1	P38838	269 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	YEL068C	P39977	110 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	NTA1	P40354	457 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	FIG4	P42837	879 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	LSM8	P47093	109 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	MRK1	P50873	501 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	MPS1	P54199	764 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	REG1	Q00816	1014 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	SNX41	Q04053	625 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	BUD22	Q04347	519 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	HRQ1	Q05549	1077 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	BLS1	Q06071	122 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	WHI4	Q07655	649 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	SPO75	Q07798	868 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	PML1	Q07930	204 aa	Predicted RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	SMC5	Q08204	1093 aa		4.99	□□□□□ -1.61
SEC39	YLR440C	RVB2	Q12464	471 aa	Known RBP	4.99	□□□□□ -1.61
SEC39	YLR440C	CAF20	P12962	161 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	GAL2	P13181	574 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	GCN3	P14741	305 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	NSP1	P14907	823 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	CYC8	P14922	966 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	RGR1	P19263	1082 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	SUI1	P32911	108 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	KTR2	P33550	425 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	YBR238C	P38330	731 aa	Known RBP	4.98	□□□□□ -1.61
SEC39	YLR440C	SBE22	P38814	852 aa		4.98	□□□□□ -1.61
SEC39	YLR440C	BZZ1	P38822	633 aa		4.98	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms