RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRP40	YKR092C	SST2	P11972	698 aa	Known RBP	4.09	□□□□□ -1.75
SRP40	YKR092C	DMC1	P25453	334 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	BMH1	P29311	267 aa	Known RBP	4.09	□□□□□ -1.75
SRP40	YKR092C	RPC34	P32910	317 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	BUD2	P33314	1104 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	NIC96	P34077	839 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	YKL063C	P35725	167 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	EHT1	P38295	451 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	FTH1	P38310	465 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	MSR1	P38714	643 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	PPE1	P38796	400 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	BDH2	P39713	417 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	YEL025C	P39991	1188 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	ARF3	P40994	183 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
SRP40	YKR092C	STU2	P46675	888 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	APS3	P47064	194 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	TAH11	P47112	604 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	LYS4	P49367	693 aa	Predicted RBP	4.09	□□□□□ -1.75
SRP40	YKR092C	PIP2	P52960	996 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	YGR054W	P53235	642 aa	Known RBP	4.09	□□□□□ -1.75
SRP40	YKR092C	SPC98	P53540	846 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	RPM2	Q02773	1202 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	MUB1	Q03162	620 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	TRS130	Q03660	1102 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	ARO80	Q04052	950 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	RBS1	Q05672	457 aa	Known RBP	4.09	□□□□□ -1.75
SRP40	YKR092C	SEC10	Q06245	871 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	SFI1	Q12369	946 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	AHC1	Q12433	566 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	CMC2	Q3E7A4	109 aa		4.09	□□□□□ -1.75
SRP40	YKR092C	RPO41	P13433	1351 aa	Known RBP	4.09	□□□□□ -1.75
SRP40	YKR092C	VPS1	P21576	704 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	LCB1	P25045	558 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	KCC4	P25389	1037 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	RDS1	P25611	832 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	CWH43	P25618	953 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	VPH2	P32341	215 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	YPT52	P36018	234 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	APD1	P38281	316 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	MSG5	P38590	489 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	OSH3	P38713	996 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	RIM4	P38741	713 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	LAM4	P38800	1345 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	YNG2	P38806	282 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	RSM25	P40496	264 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	SPO22	P40511	975 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	ROK1	P45818	564 aa	Predicted RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	AIP1	P46680	615 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	YDL183C	P48569	320 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	MNT2	P53059	558 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	MLC1	P53141	149 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	RPN14	P53196	417 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	YGR266W	P53326	701 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	COP1	P53622	1201 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	YNR061C	P53747	219 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	CNM67	P53865	581 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	HOT1	Q03213	719 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	INP2	Q03824	705 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	RBA50	Q04418	439 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	YKU80	Q04437	629 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	UFO1	Q04511	668 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	YLR287C	Q05881	355 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	NOP6	Q07623	225 aa	Known RBP	4.08	□□□□□ -1.76
SRP40	YKR092C	IRC10	Q08118	586 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	BUD7	Q08754	746 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	RKI1	Q12189	258 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	LAG2	Q92325	660 aa		4.08	□□□□□ -1.76
SRP40	YKR092C	ROM2	P51862	1356 aa	Known RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	RNR2	P09938	399 aa	Known RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	SPO16	P17122	198 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	FUR1	P18562	216 aa	Known RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	HOP1	P20050	605 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	PHO3	P24031	467 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	PTP2	P29461	750 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	HMX1	P32339	317 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	VPS17	P32913	551 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	XRS2	P33301	854 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	PMT1	P33775	817 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	UBP11	P36026	717 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	SDS22	P36047	338 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	CUE2	P36075	443 aa	Known RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	UTP9	P38882	575 aa	Known RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	CIN4	P39110	191 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	SSP120	P39931	234 aa	Known RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	MAD2	P40958	196 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	CIR1	P42940	261 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	GCD14	P46959	383 aa	Predicted RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	ALB1	P47019	175 aa	Predicted RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	BNA1	P47096	177 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	DSD1	P53095	428 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	VPS73	P53142	486 aa	Known RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	UBX2	Q04228	584 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	KRE28	Q04431	385 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	SYO1	Q07395	620 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	KEL3	Q08979	651 aa	Predicted RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	NUR1	Q12066	484 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	RTK1	Q12100	620 aa	Predicted RBP	4.07	□□□□□ -1.76
SRP40	YKR092C	PSF3	Q12146	194 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	HOS1	Q12214	470 aa		4.07	□□□□□ -1.76
SRP40	YKR092C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 859.6 ms