RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	RCN2	Q12044	265 aa		4.25	□□□□□ -1.73
PXR1	YGR280C	NHA1	Q99271	985 aa		4.25	□□□□□ -1.73
PXR1	YGR280C	UBR1	P19812	1950 aa		4.25	□□□□□ -1.73
PXR1	YGR280C	CDC39	P25655	2108 aa	Known RBP	4.24	□□□□□ -1.73
PXR1	YGR280C	HMG1	P12683	1054 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	PGI1	P12709	554 aa	Known RBP	4.24	□□□□□ -1.73
PXR1	YGR280C	APA1	P16550	321 aa	Known RBP	4.24	□□□□□ -1.73
PXR1	YGR280C	SPS19	P32573	292 aa	Known RBP	4.24	□□□□□ -1.73
PXR1	YGR280C	MRS6	P32864	603 aa	Known RBP	4.24	□□□□□ -1.73
PXR1	YGR280C	SPC42	P36094	363 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	PCL5	P38794	229 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	LYS9	P38999	446 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	YEL028W	P39989	153 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	IBA57	P47158	497 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	HOL1	P53389	586 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	ROT1	Q03691	256 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	GIC2	Q06648	383 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	PGC1	Q08959	321 aa		4.24	□□□□□ -1.73
PXR1	YGR280C	FAL1	Q12099	399 aa	Known RBP	4.24	□□□□□ -1.73
PXR1	YGR280C	CYR1	P08678	2026 aa	Known RBP	4.24	□□□□□ -1.73
PXR1	YGR280C	RPC31	P17890	251 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	PHO84	P25297	587 aa	Known RBP	4.23	□□□□□ -1.73
PXR1	YGR280C	SPC110	P32380	944 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	HIR1	P32479	840 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	MKK2	P32491	506 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	AMN1	P38285	549 aa	Predicted RBP	4.23	□□□□□ -1.73
PXR1	YGR280C	EHT1	P38295	451 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	ERP5	P38819	212 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	UBA4	P38820	440 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	YEL073C	P39974	107 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	YJL107C	P42947	387 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	YJL132W	P47014	750 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	MKC7	P53379	596 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	YDR209C	Q03480	137 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	MSH6	Q03834	1242 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	GFD1	Q04839	188 aa	Known RBP	4.23	□□□□□ -1.73
PXR1	YGR280C	YOR059C	Q08448	450 aa	Known RBP	4.23	□□□□□ -1.73
PXR1	YGR280C	ELG1	Q12050	791 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	SMF3	Q12078	473 aa	Predicted RBP	4.23	□□□□□ -1.73
PXR1	YGR280C	YDR215C	Q12240	137 aa		4.23	□□□□□ -1.73
PXR1	YGR280C	GPM1	P00950	247 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	RPS4A	P0CX35	261 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	RPS4B	P0CX36	261 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	KAR3	P17119	729 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	GAS1	P22146	559 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	DCC1	P25559	380 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	MCM5	P29496	775 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	SEC1	P30619	724 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	SMC1	P32908	1225 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	DTR1	P38125	572 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	NCL1	P38205	684 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	SPC97	P38863	823 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	TMA108	P40462	946 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	IRR1	P40541	1150 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	HXT8	P40886	569 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	YJL049W	P47048	450 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	RPN14	P53196	417 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	TIM13	P53299	105 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	MRS2	Q01926	470 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	GSF2	Q04697	403 aa	Known RBP	4.22	□□□□□ -1.73
PXR1	YGR280C	BSC2	Q05611	235 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	SWC7	Q06707	132 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	THI21	Q08975	551 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	LSO1	Q3E827	93 aa		4.22	□□□□□ -1.73
PXR1	YGR280C	RPP1A	P05318	106 aa	Predicted RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	PUT4	P15380	627 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	FUR1	P18562	216 aa	Known RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	BAS1	P22035	811 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	MSN1	P22148	382 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	AAT2	P23542	418 aa	Known RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	BMH1	P29311	267 aa	Known RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	PRO1	P32264	428 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	SSH4	P32343	579 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	SFC1	P33303	322 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	PHO11	P35842	467 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	MUD2	P36084	527 aa	Known RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	PHO12	P38693	467 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	MSS4	P38994	779 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	ROK1	P45818	564 aa	Predicted RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	PAN2	P53010	1115 aa	Predicted RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	MAL12	P53341	584 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	FRE4	P53746	719 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	SDH1	Q00711	640 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	SED5	Q01590	340 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	UTP5	Q04177	643 aa	Known RBP	4.21	□□□□□ -1.74
PXR1	YGR280C	IRC13	Q08630	104 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	SEY1	Q99287	776 aa		4.21	□□□□□ -1.74
PXR1	YGR280C	SEM1	O94742	89 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	CDC33	P07260	213 aa	Known RBP	4.2	□□□□□ -1.74
PXR1	YGR280C	SPS100	P13130	326 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	TYR1	P20049	452 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	EMC1	P25574	760 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	DBP8	P38719	431 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	PLB1	P39105	664 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	GIM4	P40005	111 aa	Known RBP	4.2	□□□□□ -1.74
PXR1	YGR280C	SNZ3	P43545	298 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	MNN11	P46985	422 aa	Known RBP	4.2	□□□□□ -1.74
PXR1	YGR280C	TCB2	P48231	1178 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	ALG12	P53730	551 aa		4.2	□□□□□ -1.74
PXR1	YGR280C	ZRG17	P53735	605 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 151.8 ms