RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 STRNO43815 780 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 ITGB8P26012 769 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 EPHB4P54760 987 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 TLE2Q04725 743 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 GRIN2CQ14957 1233 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 PRAMEF19Q5SWL8 479 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 SEC62Q99442 399 aaKnown RBP17.44■□□□□ 0.38
SRRT-219ENST00000641476 RAPGEFL1Q9UHV5 662 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 PPP1R9AQ9ULJ8 1098 aa17.44■□□□□ 0.38
SRRT-219ENST00000641476 COBLO75128 1261 aa17.43■□□□□ 0.38
SRRT-219ENST00000641476 APPP05067 770 aa17.43■□□□□ 0.38
SRRT-219ENST00000641476 LRRC41Q15345 812 aa17.43■□□□□ 0.38
SRRT-219ENST00000641476 FAM47AQ5JRC9 791 aa17.43■□□□□ 0.38
SRRT-219ENST00000641476 ABRAQ8N0Z2 381 aa17.43■□□□□ 0.38
SRRT-219ENST00000641476 NUP88Q99567 741 aaPredicted RBP17.43■□□□□ 0.38
SRRT-219ENST00000641476 NYAP2Q9P242 653 aa17.43■□□□□ 0.38
SRRT-219ENST00000641476 ADAMTS5Q9UNA0 930 aa17.43■□□□□ 0.38
SRRT-219ENST00000641476 ZNFX1Q9P2E3 1918 aaKnown RBP17.43■□□□□ 0.38
SRRT-219ENST00000641476 IGKV6D-41A0A0C4DH26 115 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 VWA5AO00534 786 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 PRDM1O75626 825 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 SLC25A27O95847 323 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 NDUFB10O96000 172 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 CLTBP09497 229 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 ZMYM1Q5SVZ6 1142 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 C1orf53Q5VUE5 145 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 IFNL3Q8IZI9 196 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 REPS2Q8NFH8 660 aa17.42■□□□□ 0.38
SRRT-219ENST00000641476 ZNF214Q9UL59 606 aaPredicted RBP17.42■□□□□ 0.38
SRRT-219ENST00000641476 DNAJB2P25686 324 aa17.41■□□□□ 0.38
SRRT-219ENST00000641476 RIOX2Q8IUF8 465 aa17.41■□□□□ 0.38
SRRT-219ENST00000641476 NACAP1Q9BZK3 213 aa17.41■□□□□ 0.38
SRRT-219ENST00000641476 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
SRRT-219ENST00000641476 SLC5A4Q9NY91 659 aa17.41■□□□□ 0.38
SRRT-219ENST00000641476 TACC3Q9Y6A5 838 aa17.41■□□□□ 0.38
SRRT-219ENST00000641476 PATL2C9JE40 543 aaKnown RBP17.4■□□□□ 0.38
SRRT-219ENST00000641476 PQBP1O60828 265 aaKnown RBP17.4■□□□□ 0.38
SRRT-219ENST00000641476 FCER1AP12319 257 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 RAG1P15918 1043 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 FPGSQ05932 587 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 CEP95Q96GE4 821 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 MAML3Q96JK9 1138 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 MMP19Q99542 508 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 SLF1Q9BQI6 1058 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 NAPBQ9H115 298 aa17.4■□□□□ 0.38
SRRT-219ENST00000641476 F5H6K3 240 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 FOXP2O15409 715 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 COPB2P35606 906 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 KLRC3Q07444 240 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 PPARAQ07869 468 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
SRRT-219ENST00000641476 ANKRD45Q5TZF3 282 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 CCDC129Q6ZRS4 1044 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 LRRC47Q8N1G4 583 aaKnown RBP17.39■□□□□ 0.37
SRRT-219ENST00000641476 ZNF576Q9H609 170 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 XPNPEP3Q9NQH7 507 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
SRRT-219ENST00000641476 PHF24Q9UPV7 400 aa17.39■□□□□ 0.37
SRRT-219ENST00000641476 RARBP10826 455 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 STAT3P40763 770 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 PDE4BQ07343 736 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
SRRT-219ENST00000641476 TIFAQ96CG3 184 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 TEX13BQ9BXU2 312 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 TMEM39AQ9NV64 488 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 MTMR4Q9NYA4 1195 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 CLIP2Q9UDT6 1046 aa17.38■□□□□ 0.37
SRRT-219ENST00000641476 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.37■□□□□ 0.37
SRRT-219ENST00000641476 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.37■□□□□ 0.37
SRRT-219ENST00000641476 KIAA0355O15063 1070 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 TTLL1O95922 423 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 PGK2P07205 417 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 TSPY3P0CV98 308 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 TSPY8P0CW00 308 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 PDE1AP54750 535 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 KCTD2Q14681 263 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 SNRNP48Q6IEG0 339 aaKnown RBP17.37■□□□□ 0.37
SRRT-219ENST00000641476 SYNPO2Q9UMS6 1093 aa17.37■□□□□ 0.37
SRRT-219ENST00000641476 A0A1W2PQ45 241 aaPredicted RBP17.36■□□□□ 0.37
SRRT-219ENST00000641476 A0A1W2PQY0 241 aa17.36■□□□□ 0.37
SRRT-219ENST00000641476 PGK1P00558 417 aa17.36■□□□□ 0.37
SRRT-219ENST00000641476 SLC3A2P08195 630 aaKnown RBP17.36■□□□□ 0.37
SRRT-219ENST00000641476 RNF180Q86T96 592 aa17.36■□□□□ 0.37
SRRT-219ENST00000641476 GMCL1P1Q8NEA9 526 aa17.36■□□□□ 0.37
SRRT-219ENST00000641476 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
SRRT-219ENST00000641476 MKL1Q969V6 931 aa17.36■□□□□ 0.37
SRRT-219ENST00000641476 EVI5LQ96CN4 794 aa17.36■□□□□ 0.37
SRRT-219ENST00000641476 GAS2L1Q99501 681 aaPredicted RBP17.36■□□□□ 0.37
SRRT-219ENST00000641476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.36■□□□□ 0.37
SRRT-219ENST00000641476 ZNF792Q3KQV3 632 aa17.35■□□□□ 0.37
SRRT-219ENST00000641476 VPS53Q5VIR6 699 aa17.35■□□□□ 0.37
SRRT-219ENST00000641476 PRPF38AQ8NAV1 312 aaKnown RBP17.35■□□□□ 0.37
SRRT-219ENST00000641476 ADAMTS19Q8TE59 1207 aa17.35■□□□□ 0.37
SRRT-219ENST00000641476 KIFC2Q96AC6 838 aa17.35■□□□□ 0.37
SRRT-219ENST00000641476 LENG1Q96BZ8 264 aaPredicted RBP17.35■□□□□ 0.37
SRRT-219ENST00000641476 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
SRRT-219ENST00000641476 LRRC37A2A6NM11 1700 aa17.34■□□□□ 0.37
SRRT-219ENST00000641476 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
SRRT-219ENST00000641476 TFAP4Q01664 338 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms