RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	NEK8	Q86SG6	692 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	HOMER1	Q86YM7	354 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	DHX40	Q8IX18	779 aa	Known RBP	9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	CCDC150	Q8NCX0	1101 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	ANKRD20A12P	Q8NF67	263 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	PIBF1	Q8WXW3	757 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	LRRC27	Q9C0I9	530 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	NYAP2	Q9P242	653 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	MTMR7	Q9Y216	660 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	MYH4	Q9Y623	1939 aa		9.44	□□□□□ -0.9
PNKP-231	ENST00000640501	GREB1L	Q9C091	1923 aa	Predicted RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	ATRNL1	Q5VV63	1379 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	BIN1	O00499	593 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	SERPINC1	P01008	464 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	AKR1B1	P15121	316 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	PPP1R2	P41236	205 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	TGFB2	P61812	414 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	AMPD3	Q01432	767 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	ATP2B2	Q01814	1243 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	EVX2	Q03828	476 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	ZNF543	Q08ER8	600 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	RBM26	Q5T8P6	1007 aa	Known RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	RSBN1L	Q6PCB5	846 aa	Predicted RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	USP17L2	Q6R6M4	530 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	METTL16	Q86W50	562 aa	Known RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	NIM1K	Q8IY84	436 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	LARGE2	Q8N3Y3	721 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	SPC24	Q8NBT2	197 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	C7orf43	Q8WVR3	580 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	SYMPK	Q92797	1274 aa	Known RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	CUL5	Q93034	780 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	MKL1	Q969V6	931 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	DHX58	Q96C10	678 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	SH2D4A	Q9H788	454 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	ANO8	Q9HCE9	1232 aa	Predicted RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	DDX4	Q9NQI0	724 aa	Known RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	ZNF219	Q9P2Y4	722 aa	Predicted RBP	9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	SERTAD1	Q9UHV2	236 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	PCDHA6	Q9UN73	950 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	PCDHA8	Q9Y5H6	950 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	PCDHA5	Q9Y5H7	936 aa		9.43	□□□□□ -0.9
PNKP-231	ENST00000640501	USP17L5	A8MUK1	530 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	ZBTB5	O15062	677 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	CCP110	O43303	1012 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	ACTN4	O43707	911 aa	Known RBP	9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	CYTH3	O43739	400 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	C21orf2	O43822	256 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	OFD1	O75665	1012 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	OR52Z1	P0C646	297 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	GOLGA8H	P0CJ92	632 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	GCFC2	P16383	781 aa	Known RBP	9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	CDK11B	P21127	795 aa	Known RBP	9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	SHMT1	P34896	483 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	STAT6	P42226	847 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	TNNI2	P48788	182 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	STIM1	Q13586	685 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	DLGAP5	Q15398	846 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	NPY5R	Q15761	445 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	ABCB5	Q2M3G0	1257 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	CFAP100	Q494V2	611 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	FKBP1C	Q5VVH2	108 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	TATDN1	Q6P1N9	297 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	POTEA	Q6S8J7	498 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	SLC51A	Q86UW1	340 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	LRRC47	Q8N1G4	583 aa	Known RBP	9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	PDILT	Q8N807	584 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	AGBL3	Q8NEM8	1001 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	CALML4	Q96GE6	196 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	CTAGE1	Q96RT6	745 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	PIGS	Q96S52	555 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	ARHGEF10L	Q9HCE6	1279 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	VAT1L	Q9HCJ6	419 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	PIM2	Q9P1W9	311 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	STK24	Q9Y6E0	443 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	KIF13B	Q9NQT8	1826 aa		9.42	□□□□□ -0.9
PNKP-231	ENST00000640501	ZNF646	O15015	1829 aa	Predicted RBP	9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	9.41	□□□□□ -0.9
PNKP-231	ENST00000640501		M0R2N6	131 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	SLC26A4	O43511	780 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	GTPBP6	O43824	516 aa	Predicted RBP	9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	CCNT1	O60563	726 aa	Known RBP	9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	SLC1A4	P43007	532 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	MDM2	Q00987	491 aa	Predicted RBP	9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	ICA1	Q05084	483 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	SPAG1	Q07617	926 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	MORC3	Q14149	939 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	TPD52L1	Q16890	204 aa	Predicted RBP	9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	INF2	Q27J81	1249 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	FILIP1L	Q4L180	1135 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	SPECC1	Q5M775	1068 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	RRAGB	Q5VZM2	374 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	CCDC186	Q7Z3E2	898 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	GMCL1P1	Q8NEA9	526 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	CCDC112	Q8NEF3	446 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	ENOX1	Q8TC92	643 aa	Known RBP	9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	FBXO41	Q8TF61	875 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	JDP2	Q8WYK2	163 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	CDK5RAP3	Q96JB5	506 aa		9.41	□□□□□ -0.9
PNKP-231	ENST00000640501	NAP1L5	Q96NT1	182 aa	Predicted RBP	9.41	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms