RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 VPS53Q5VIR6 699 aa23.85■■□□□ 1.41
CLN6-222ENST00000637667 CPXCR1Q8N123 301 aa23.85■■□□□ 1.41
CLN6-222ENST00000637667 TINF2Q9BSI4 451 aa23.85■■□□□ 1.41
CLN6-222ENST00000637667 SLC38A10Q9HBR0 1119 aa23.85■■□□□ 1.41
CLN6-222ENST00000637667 HELLSQ9NRZ9 838 aa23.85■■□□□ 1.41
CLN6-222ENST00000637667 RIPK3Q9Y572 518 aa23.85■■□□□ 1.41
CLN6-222ENST00000637667 BMP3P12645 472 aa23.84■■□□□ 1.41
CLN6-222ENST00000637667 ATN1P54259 1190 aaPredicted RBP23.84■■□□□ 1.41
CLN6-222ENST00000637667 CTDSPL2Q05D32 466 aa23.84■■□□□ 1.41
CLN6-222ENST00000637667 LNPKQ9C0E8 428 aa23.84■■□□□ 1.41
CLN6-222ENST00000637667 SZT2Q5T011 3432 aa23.83■■□□□ 1.41
CLN6-222ENST00000637667 KBTBD13C9JR72 458 aa23.83■■□□□ 1.41
CLN6-222ENST00000637667 PPP4R3BQ5MIZ7 849 aa23.83■■□□□ 1.41
CLN6-222ENST00000637667 RAVER2Q9HCJ3 691 aaKnown RBP23.83■■□□□ 1.41
CLN6-222ENST00000637667 INCENPQ9NQS7 918 aa23.83■■□□□ 1.41
CLN6-222ENST00000637667 ANAPC4Q9UJX5 808 aa23.83■■□□□ 1.41
CLN6-222ENST00000637667 ZNFX1Q9P2E3 1918 aaKnown RBP23.82■■□□□ 1.4
CLN6-222ENST00000637667 TSPY2A6NKD2 308 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 SOX1O00570 391 aaPredicted RBP23.82■■□□□ 1.4
CLN6-222ENST00000637667 MYCNP04198 464 aaPredicted RBP23.82■■□□□ 1.4
CLN6-222ENST00000637667 SLC4A3P48751 1232 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 ALX1Q15699 326 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 TICAM2Q86XR7 235 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 SMC5Q8IY18 1101 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 DDX11Q96FC9 970 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 FAM227BQ96M60 508 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 RWDD1Q9H446 243 aaPredicted RBP23.82■■□□□ 1.4
CLN6-222ENST00000637667 ISY1Q9ULR0 285 aaKnown RBP23.82■■□□□ 1.4
CLN6-222ENST00000637667 MYH4Q9Y623 1939 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 LAMA3Q16787 3333 aa23.82■■□□□ 1.4
CLN6-222ENST00000637667 DNAJC25-GNG10A0A024R161 153 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 A0A0D9SFI3 127 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 TAL1P17542 331 aaPredicted RBP23.81■■□□□ 1.4
CLN6-222ENST00000637667 OAZ1P54368 228 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 RTP1P59025 263 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 LRRC41Q15345 812 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 MCMDC2Q4G0Z9 681 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 GMCL1Q96IK5 515 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 UBE2OQ9C0C9 1292 aaKnown RBP23.81■■□□□ 1.4
CLN6-222ENST00000637667 CNPY2Q9Y2B0 182 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 TACC3Q9Y6A5 838 aa23.81■■□□□ 1.4
CLN6-222ENST00000637667 TMEM232C9JQI7 657 aa23.8■■□□□ 1.4
CLN6-222ENST00000637667 ZNF865P0CJ78 1059 aaPredicted RBP23.8■■□□□ 1.4
CLN6-222ENST00000637667 FDX1P10109 184 aa23.8■■□□□ 1.4
CLN6-222ENST00000637667 RARBP10826 455 aa23.8■■□□□ 1.4
CLN6-222ENST00000637667 SLC1A4P43007 532 aa23.8■■□□□ 1.4
CLN6-222ENST00000637667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.8■■□□□ 1.4
CLN6-222ENST00000637667 MSL3Q8N5Y2 521 aaKnown RBP23.8■■□□□ 1.4
CLN6-222ENST00000637667 XPNPEP3Q9NQH7 507 aa23.8■■□□□ 1.4
CLN6-222ENST00000637667 IL17RBQ9NRM6 502 aa23.8■■□□□ 1.4
CLN6-222ENST00000637667 STX8Q9UNK0 236 aa23.8■■□□□ 1.4
CLN6-222ENST00000637667 ORC4O43929 436 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 RANBP6O60518 1105 aaKnown RBP23.79■■□□□ 1.4
CLN6-222ENST00000637667 NMT2O60551 498 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 MCCP23508 829 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 STAT2P52630 851 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 FAM160B2Q86V87 743 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 TDHQ8IZJ6 230 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 CHST13Q8NET6 341 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 CHURC1Q8WUH1 139 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 LRCH3Q96II8 777 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 FBXO40Q9UH90 709 aa23.79■■□□□ 1.4
CLN6-222ENST00000637667 TRIM6-TRIM34B2RNG4 842 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 FGAP02671 866 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 FGRP09769 529 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 AKR1A1P14550 325 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 ADCYAP1R1P41586 468 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 MDM2Q00987 491 aaPredicted RBP23.78■■□□□ 1.4
CLN6-222ENST00000637667 NMIQ13287 307 aaPredicted RBP23.78■■□□□ 1.4
CLN6-222ENST00000637667 B4GALNT3Q6L9W6 998 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 SLC39A5Q6ZMH5 540 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 STAG1Q8WVM7 1258 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 CHMP4CQ96CF2 233 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 ATP11BQ9Y2G3 1177 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 DNAH12Q6ZR08 3092 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 SYNGAP1Q96PV0 1343 aa23.78■■□□□ 1.4
CLN6-222ENST00000637667 SMCHD1A6NHR9 2005 aa23.77■■□□□ 1.4
CLN6-222ENST00000637667 IKQ13123 557 aaPredicted RBP23.77■■□□□ 1.4
CLN6-222ENST00000637667 MAMDC4Q6UXC1 1216 aa23.77■■□□□ 1.4
CLN6-222ENST00000637667 ZNF467Q7Z7K2 595 aaPredicted RBP23.77■■□□□ 1.4
CLN6-222ENST00000637667 ZNF589Q86UQ0 364 aaPredicted RBP23.77■■□□□ 1.4
CLN6-222ENST00000637667 ANKRD35Q8N283 1001 aa23.77■■□□□ 1.4
CLN6-222ENST00000637667 FERMT2Q96AC1 680 aa23.77■■□□□ 1.4
CLN6-222ENST00000637667 PLA2G6O60733 806 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 SNAI1O95863 264 aaPredicted RBP23.76■■□□□ 1.39
CLN6-222ENST00000637667 PGK1P00558 417 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 IGHDP01880 384 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 HSPD1P10809 573 aaKnown RBP23.76■■□□□ 1.39
CLN6-222ENST00000637667 SNX17Q15036 470 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 KCTD1Q719H9 257 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 CHD1LQ86WJ1 897 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 EXOC6Q8TAG9 804 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 RILPL2Q969X0 211 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 LBHD1Q9BQE6 289 aaPredicted RBP23.76■■□□□ 1.39
CLN6-222ENST00000637667 HOMER2Q9NSB8 354 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 PRKAG2Q9UGJ0 569 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 PHF24Q9UPV7 400 aa23.76■■□□□ 1.39
CLN6-222ENST00000637667 NOVP48745 357 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 LRIT3Q3SXY7 679 aa23.75■■□□□ 1.39
CLN6-222ENST00000637667 RCSD1Q6JBY9 416 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms