RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZSWIM8A7E2V4 1837 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 ADCY3O60266 1144 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 HMGB1P09429 215 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 MCM5P33992 734 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 STAT3P40763 770 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 WDR78Q5VTH9 848 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 CREB3L3Q68CJ9 461 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 TMTC2Q8N394 836 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 TMEM87BQ96K49 555 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 APBA2Q99767 749 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 MOV10L1Q9BXT6 1211 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 PORCNQ9H237 461 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 SLC38A10Q9HBR0 1119 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 FBXO28Q9NVF7 368 aa16.41■□□□□ 0.22
SNRPA1-216ENST00000626000 CCDC85CA6NKD9 419 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 SLC27A2O14975 620 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 SNHG28P0DPA3 235 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 PDHBP11177 359 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 PTPREP23469 700 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 TMEM132BQ14DG7 1078 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 Q3C1V9 767 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 TKFCQ3LXA3 575 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 TSGA10IPQ3SY00 556 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 BTNL9Q6UXG8 535 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 TMEM106CQ9BVX2 250 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 ZNF214Q9UL59 606 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 WDR19Q8NEZ3 1342 aa16.4■□□□□ 0.22
SNRPA1-216ENST00000626000 IFIT3O14879 490 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 HMGCRP04035 888 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 HOXC6P09630 235 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 FCER1AP12319 257 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 ERCC3P19447 782 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 CAP1Q01518 475 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 ZNF543Q08ER8 600 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 MAP2K5Q13163 448 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 GRB14Q14449 540 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 KCTD2Q14681 263 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 WTAPQ15007 396 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 MORN1Q5T089 497 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 POTEEQ6S8J3 1075 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 NCAPG2Q86XI2 1143 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 ZKSCAN3Q9BRR0 538 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 GJD2Q9UKL4 321 aa16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 COL11A1P12107 1806 aaPredicted RBP16.39■□□□□ 0.21
SNRPA1-216ENST00000626000 TRAF1Q13077 416 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 SEC23AQ15436 765 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 SNRNP48Q6IEG0 339 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 KCTD1Q719H9 257 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 MB21D2Q8IYB1 491 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 CHST13Q8NET6 341 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 REPS2Q8NFH8 660 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 NKX2-3Q8TAU0 364 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 GABRQQ9UN88 632 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 DOCK3Q8IZD9 2030 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 PLXNB2O15031 1838 aa16.38■□□□□ 0.21
SNRPA1-216ENST00000626000 ECM2O94769 699 aaPredicted RBP16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 PARP1P09874 1014 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 TMEM67Q5HYA8 995 aa16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 SYDE2Q5VT97 1194 aa16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 USP6NLQ92738 828 aa16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 MAF1Q9H063 256 aa16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 PRR12Q9ULL5 1215 aa16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 MTMR7Q9Y216 660 aa16.37■□□□□ 0.21
SNRPA1-216ENST00000626000 STOX1Q6ZVD7 989 aa16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 CYB5R4Q7L1T6 521 aa16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 CATIPQ7Z7H3 387 aa16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 NEK1Q96PY6 1258 aa16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 MMP19Q99542 508 aa16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
SNRPA1-216ENST00000626000 PRC1O43663 620 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 DDAH1O94760 285 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 ICAM1P05362 532 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 CALM1P0DP23 149 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 CALM2P0DP24 149 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 CALM3P0DP25 149 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 ADORA2AP29274 412 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 KIF5BP33176 963 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 HSPA4P34932 840 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 LIFRP42702 1097 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 CPXCR1Q8N123 301 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 RANBP17Q9H2T7 1088 aaKnown RBP16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 ACAD9Q9H845 621 aa16.35■□□□□ 0.21
SNRPA1-216ENST00000626000 HTTP42858 3142 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 INHAP05111 366 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 CYP2B6P20813 491 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 PSMA5P28066 241 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 OLFML2BQ68BL8 750 aa16.34■□□□□ 0.21
SNRPA1-216ENST00000626000 MSL3Q8N5Y2 521 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms